Sphingobacterium sp. CZ-2: E3D81_02260
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Entry
E3D81_02260 CDS
T06166
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphz02000
]
E3D81_02260
Transporters [BR:
sphz02000
]
Other transporters
Pores ion channels [TC:
1
]
E3D81_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
DUF6795
Motif
Other DBs
NCBI-ProteinID:
QBR11050
UniProt:
A0A4P7DS25
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All DBs
Position
complement(516268..519294)
Genome browser
AA seq
1008 aa
AA seq
DB search
MPNYYSKQNHRTGFVRGSILCFALLACSYGYANAMPKAATVEVNSVIAQQTVTGTVKNSA
NGSPLSGVTIKVKGKDASTQTDASGKFSIAAENGDVLQVSYIGFANQEVTVSGTMANVNL
ISEEESLEEVVVVGYGTQRRKEITSAVASVKEKDFNKGGMRSPMDLVQGKVAGLNITRTQ
GSNPNSSTSIQLRGMASLKGTNSPLIVVDGIPGGNLDLIKQGDIESIDVLKDGSAAAIYG
TRGNGGVILVTTKKGKAGAAQFEYMTYGQTERVNRKPSMLSADQFRQLIVQGENKPDLDL
GASTDLYDELINKDNFSHFHNFIASGGGENSTYRASFNYENAKGIAKQNGREQFGGRINF
NQTGLDNRLTLTANLAANFNKANLLGGKTGDFEQTIQRNPTAPIMNPDGTYYQTQEYNNY
NPMSRLAHRIEERNQQTFSGDARLKFQILDELSVSAFGSYVRDNWNDRQYRSILDWDQRP
DDTEYDGTGYAYKRNDLNWTKTFESTIDYNKTFNDVHTFTGLLGYSYQYMTAEYFNMSNS
GFSTDGFLDWDFNSGTAIINTKYPRPALGSFKDENTLIAFFGRVNYNYADKYFVTAILRR
EGSSKFGANNKWGNFPAISAGWNISNEDFFGNKDVVNELKLRAGYGVTGNQGIPNYLSFI
RLGTGGYYPQDGVYYQTYGVENNANPDLKWEQKAETNIGLDFALLNSKITGALDVYHRKT
TDLLYEYNAQLPAYVQPSIWYNVGEVVNKGVELQLTAFPISRENFTWQVDFTGNYQKNKL
AKLSSDIFKSNWLEFGGLPSPGNLGNAMRLEEGGEIGNFYGKRFAGFDDEGKWLFYKADG
STAHAGDMNNDDRAYIGNGIPKFQASLGNRFTYKGFDLTVFLRGKFKYDILNTADMFFGN
KKWIPNNVFESAFGKHDQLNDDPQYSDYYLENGSFVKIDNITLGYNIRTKTPLIRNMYVY
LTARNIATITSYSGIDPELQDTGFDGGIDSRGFYPRTQSWTMGLNIGF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgccgaactattacagtaaacaaaatcatcgcacaggctttgtacgggggagtatttta
tgctttgccctcttggcctgcagctatgggtatgccaatgccatgcctaaagctgccacc
gttgaggtaaattccgtaatcgctcaacagacagttaccggaacggtgaagaacagtgcc
aatggatcacccttatcaggggttaccattaaggtcaaaggaaaggatgccagcacccaa
acagatgcctccggaaaattcagcattgccgccgaaaatggcgatgtcctacaggtaagc
tatattggcttcgccaaccaggaggtcaccgttagtggcaccatggccaatgtcaatctg
atttccgaagaagaaagtctggaggaagtagtggtggtcggatacggtacacaaagaagg
aaggaaatcacctctgctgtagcctccgtaaaagaaaaagatttcaataaaggcgggatg
cgtagtcccatggaccttgttcagggaaaagtggccggtctgaacatcacccgtacccaa
ggtagcaatcccaattccagtaccagcatccaattacggggtatggcttccctaaaagga
accaattcacccttgattgtagtcgatggtattccgggcgggaacttggatctgatcaaa
cagggcgatatcgaatccatcgatgtcctgaaggacggttccgccgctgcgatctatggt
acccgcggtaatggcggggtcatcttggtcactaccaagaaagggaaagcaggagccgcc
caattcgaatacatgacctatggacagaccgaaagagtcaaccgaaaacctagcatgtta
agtgccgatcaattccgacagctgatcgttcagggtgaaaacaaacccgatcttgatctt
ggtgcttccaccgatctatacgatgagctgatcaataaggacaatttttcccatttccat
aatttcatcgccagtggtgggggagaaaattccacttaccgggcatccttcaactatgaa
aatgctaagggtattgccaaacagaatggaagagaacaatttggagggcgtatcaacttc
aatcagacaggtttggataaccgtttgacattgaccgctaacctggctgccaatttcaat
aaggccaatcttttaggcggaaagacaggcgattttgagcagactatccaaagaaatccg
acggcacccatcatgaatccggatgggacctactatcaaacacaagaatataacaactat
aacccgatgagccgtttggcccataggatcgaagagcgaaaccagcagaccttctccgga
gatgctcgcttgaaattccagatattggatgaattaagcgtgtccgccttcggttcctac
gttcgcgacaactggaatgaccgacaatatcggtcgatcctggattgggaccaacggccg
gatgataccgaatatgatggaacaggatatgcctataagcgtaacgacctgaactggacc
aaaacgttcgaaagtaccatcgactataacaaaaccttcaacgatgtacataccttcacc
ggtctattgggctacagttaccaatacatgaccgcggagtatttcaacatgtcgaactcg
ggattttccaccgatggattcctggattgggatttcaattccggaacagctatcatcaat
accaaataccctagaccagctttaggatctttcaaggatgaaaatacgctgatcgccttc
tttggaagggttaactacaattatgcggataaatatttcgtgacggcgatccttcgtaga
gagggttcctctaagtttggagcgaacaataaatggggtaacttcccagcgatctccgct
ggttggaacatcagcaacgaagatttcttcggcaacaaggacgtggtcaatgaattgaaa
cttcgcgctggatatggggttacaggtaaccaagggatcccgaattacctttcctttatc
cgtttaggtacgggcgggtattacccacaggatggggtatattaccagacctatggtgta
gagaacaatgccaacccggatctgaaatgggaacagaaggcagagaccaacatcggtttg
gattttgcgctcctaaacagcaagatcactggtgcattggatgtctaccatcggaagacc
accgaccttctgtatgaatataatgcgcaattgcctgcctatgtgcagccaagcatttgg
tataacgtaggagaggtggtgaacaaaggggtggaactgcaattgaccgctttcccaatc
tctagggaaaacttcacctggcaggtcgatttcaccggtaattaccagaaaaataaattg
gcgaaactttccagcgatatcttcaaaagcaactggttggaattcggaggacttcctagt
ccggggaatttaggtaatgccatgcgtttggaagaaggcggcgagatcgggaatttctat
ggtaaacgttttgccggattcgatgacgaagggaaatggcttttctataaagccgatggc
agcaccgcccatgccggagatatgaacaacgatgaccgtgcgtatatcggaaacgggata
ccaaaattccaggcttccctgggtaaccgttttacctataaaggttttgacctgacggta
ttccttcgaggaaaattcaagtatgatatcctaaatacggccgacatgttctttggtaac
aagaaatggattccgaacaatgtttttgagtctgcttttggaaagcatgatcaattgaac
gatgatccacagtattccgattactacctagagaatggttcctttgttaagattgacaac
atcaccttaggttataacatcagaaccaagaccccgttgatccgcaatatgtatgtatac
ctgacagcaagaaatattgcgactattacgtcctattcagggatcgatccggagctgcag
gatactggttttgatggcgggatagattcgcgtggtttttatccgaggacgcaatcatgg
acgatgggattaaatattggcttttaa
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