KEGG   Sphingobacterium sp. CZ-2: E3D81_03335
Entry
E3D81_03335       CDS       T06166                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sphz  Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:sphz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphz03400]
    E3D81_03335
Enzymes [BR:sphz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E3D81_03335
    5.6.2.6  RNA 3'-5' helicase
     E3D81_03335
DNA repair and recombination proteins [BR:sphz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E3D81_03335
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QBR11256
UniProt: A0A4P7DP88
LinkDB
Position
747032..749467
AA seq 811 aa
MQNELAEVWFYNQGWTAHDFQKSCWKAISKGQSGILNAPTGYGKTFAIWFGVLKSYYDQQ
NQLNKPKKKQLHTLWITPLRALSKEIHKATSQVSQDLDLDYEIELRTGDTTTAVRQKQRK
NPPQALITTPESVHLILATKGGQDYFKNLEFIIVDEWHELLGSKRGVLMELAISRIKSIN
PKLKIWGISATIGNLQEAKDILLGEHNKGTLIKANINKQIAIETVFPDNLEKFPWAGHLG
IKLLDKVVDIINNYQTTLIFTNTRSQAEIWYQQIITHYPEFAGLIAIHHGSLSDEVRFWV
EEALHEGRLKAVVCTSSLDLGVDFRPVDCVVQVGSPKGIARFLQRAGRSGHRPDATSVIF
YVPTNSLEIIEGDSLKYAVSNHIVESRIPYIRSFDVLIQYLMTLAVGDGFQAEDILQEVA
QTHCFSSISQEEFDQCMALLIHGGTSLTAYDDFHRLELVDGLYKVTNRRIAMRHRLSIGA
IVSDLMMRVKFLSGKYLGSIEESFIAKLNIGDVFWFSGRQLELVQIIANDAIVRASEKKK
GVIPSWMGGRFAISPDLGIAIRHSFKNIHKKRGVSPEITFLKPLFDEQERLSKLPKEDEL
LVEYIQTKYGNHFFFYPFDGKLVHEGMAQVIAYRLGNIKPATFSIASNEYGFELLSDTDY
EVDDKFLQKLFSPQHLHQDINSGINVQEMAKRRFRDIAGIAGLVFQGFPGKQMKSKHLQA
NAGLFFSVFSEYEPNNLLLREAYDEVFDFQLEEGRMQQAFERIANHKILFSRPEKLTPFS
FPIFAESFRERYSNEDWQSRLEKVKMQLLNG
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgcagaacgaattggcggaagtatggttttataaccaaggttggacagcacatgatttc
caaaaatcctgttggaaagccatttccaaaggccaatccgggatattaaatgcaccaaca
ggatacggaaaaacttttgctatctggtttggggtattaaagtcctattacgatcaacaa
aatcaacttaacaaacccaagaaaaaacaattacatacactatggattacgcctttgcgc
gcattatccaaagaaattcataaagctacctcccaagtttcccaagatttagatctcgac
tatgaaattgaactaagaacaggagacaccaccacagcagtacgacagaaacaacgaaaa
aatccccctcaagcattgatcactacacccgaaagtgtgcatctgatcctggccacgaaa
ggcgggcaagactatttcaaaaacctggaattcattatcgtagatgaatggcatgaatta
ttaggatctaaaagaggtgtgctcatggaattggccatcagccggattaaatccataaac
cccaaactaaagatttggggaatctcggccaccattggaaaccttcaggaagcaaaggat
attttattgggtgaacataacaaaggcacactcattaaagcaaacatcaataagcaaata
gcaattgaaactgtgtttccagataatttggaaaaatttccatgggctggacatttagga
atcaaactgttggataaagtagtcgatatcatcaataactaccaaaccacccttattttt
acgaataccagatcccaagcagaaatctggtatcaacaaatcattacccattatccagaa
tttgcaggattgatcgccatccatcatggttcattaagtgatgaggtgcgattttgggta
gaggaggctttacatgaaggaagattaaaagccgttgtttgtacaagtagtttagattta
ggtgtagatttcagacctgttgattgtgttgttcaagtgggatcccccaaaggaatagcc
cgatttcttcagcgagccgggcgttctggacaccgaccagatgccacttcagttatcttt
tatgtccccaccaattcgctggagatcattgaaggtgattccttaaaatatgctgtttcg
aatcatatcgtagagagtagaatcccttatatccgatcctttgatgtattgatccaatac
ctcatgaccttggctgttggagatggtttccaagcggaagatattcttcaggaagtcgcc
cagacccattgcttttccagtatcagtcaggaggaatttgaccaatgtatggcgctgttg
atccatggaggaaccagcttaacagcttatgatgattttcatcgattggaactggtagat
ggattatataaagttaccaatagaaggatcgctatgcggcataggttatccatcggcgct
attgtatccgatctcatgatgcgggtaaagttcctttcaggcaaatacttaggatctatc
gaagaatcgtttattgcgaaattaaatattggtgatgttttttggttctcgggaagacaa
ttagaattggtccagatcattgccaatgatgcaatagtaagagcatcggaaaagaagaaa
ggggtcattccatcctggatgggaggaaggttcgccatttcaccagatctggggatagct
atcagacatagtttcaagaatattcataaaaaaaggggagtttctcccgaaataaccttc
ttaaagcctttgttcgatgaacaagaaagattatccaaactacccaaggaggatgaatta
ttggttgagtatattcaaaccaaatacggcaaccatttctttttctatccttttgatgga
aaattagtacatgaaggaatggcgcaggttattgcgtatcgattaggaaacatcaaaccg
gccacgttcagcattgccagtaatgaatacggttttgagttgttatcggatacagattat
gaggtggatgataaatttctgcaaaaattattctcgccccagcatctccatcaggatata
aactccggaattaatgtgcaggaaatggccaaacgtagatttagggatattgctggaata
gcaggattggtcttccaggggttcccaggaaagcagatgaaaagtaaacacctccaggcg
aatgcgggtttgttcttttcagttttttcggaatatgaaccaaacaacctacttttgcgg
gaagcatatgatgaagtttttgattttcaattggaagaaggtagaatgcaacaagccttt
gaacgaatagcaaatcataaaatcttattcagccgtcctgaaaaactaacgcccttttcc
tttccgatttttgcggaatcctttagagagcggtactccaatgaggattggcaaagccgc
ttagaaaaagtgaaaatgcagttgttgaatggctaa

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