Sphingobacterium sp. CZ-2: E3D81_03585
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Entry
E3D81_03585 CDS
T06166
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00541
Biosynthesis of various nucleotide sugars
sphz01100
Metabolic pathways
sphz01250
Biosynthesis of nucleotide sugars
Module
sphz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E3D81_03585
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sphz01005
]
E3D81_03585
Enzymes [BR:
sphz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
E3D81_03585
Lipopolysaccharide biosynthesis proteins [BR:
sphz01005
]
Lipid A
E3D81_03585
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
QBR11306
UniProt:
A0A4P7DPD1
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Position
803926..804741
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AA seq
271 aa
AA seq
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MINTYLPSIKNGNSTAFFLMAGPCAIEGEEIALRIAERIVTITDKLNIPYIFKGSYRKAN
RSRVDSFTGIGDEKALKILEKVGKTFGVPTVTDIHESHEAAMAAAYVDVLQIPAFLCRQT
ELLVAAAETGKVVNIKKGQFLSAESMKFAVDKVKDSGNDKVFLTDRGNTFGYQDLIVDYR
GLPVMQSFGVPTVMDCTHSLQQPNQTSGVTGGKPELIGTIAKAAIAVGADGLFIETHPDP
ANAKSDGANMLHLDRLEDLLTQLIRIREAIL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatacctatttaccatccattaagaatggtaattctactgccttttttctgatg
gcaggaccatgtgcgatcgaaggggaagaaattgccctacgtatcgccgaacgaatcgtt
acgattacggataaattgaatattccttacattttcaagggttcttaccgtaaagcgaac
cgctctagagtggattcctttaccggaattggcgatgagaaggctttgaagattttggaa
aaagtagggaagacttttggtgttcctacggttactgacattcatgaaagccacgaagcg
gcgatggctgctgcttatgtggatgtattgcagatccctgctttcctttgccgtcaaaca
gaattgttggtggcagcagcagagaccggaaaagtggtgaatattaaaaaaggacaattc
ctttcggcggaatctatgaaatttgccgttgataaggtgaaggattccggaaatgataag
gtgttcctgacagatcgtgggaatacttttggataccaagacctgatcgtggattaccga
ggattgcctgtgatgcaatcttttggggttccgactgtaatggactgtacgcattccttg
caacaacctaaccagacttctggagtaacaggaggaaaacctgaattgattggaacgatt
gcgaaagcagcaattgcggttggtgctgatgggctttttattgagacccatcctgatcca
gcaaatgcgaaatctgatggtgcaaatatgttgcatttggataggctagaggacctgttg
acacagttgattaggattagggaagctattttgtag
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