Sphingobacterium sp. CZ-2: E3D81_03980
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Entry
E3D81_03980 CDS
T06166
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00300
Lysine biosynthesis
sphz00470
D-Amino acid metabolism
sphz00550
Peptidoglycan biosynthesis
sphz01100
Metabolic pathways
sphz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3D81_03980
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E3D81_03980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3D81_03980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
E3D81_03980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphz01011
]
E3D81_03980
Enzymes [BR:
sphz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
E3D81_03980
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
E3D81_03980
Peptidoglycan biosynthesis and degradation proteins [BR:
sphz01011
]
Precursor biosynthesis
Amino acid ligase
E3D81_03980
Racemase
E3D81_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QBR11381
LinkDB
All DBs
Position
complement(885400..887832)
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AA seq
810 aa
AA seq
DB search
MYSIGKVNEIVGGMAIRIPNSDQQISELVYDSRKISLPEESLFFALSATRDGHEFIADAY
NQGIRSFIISKDVPFLMDKTDVNVLKVHDTLKALQDLAAYHRKQFHFPIIGITGSNGKSI
VKAWLTQMLSIDKKVYQSPKSYNSQIGVALSLWNLQGHYDLAIIEAGISEPGEMDALAAM
IKPDIGVFTNLGIAHAQHFKSKEEKLAEKLKLFKESNLLIAGSSYVPKEMVENKPLFSWG
YLEQDDLQLLEQQQVGQETQLDIQYKGSIHQLKIPFTDKASIENVVSCVAIMLNLQYDIA
NIQQRVYGLKPLEMRLQLKKGINNSSIIDDSYSNDLASLKISLDFLQQQNQYQKKSIILS
EMDGLEENEKFQKKLSEILNGQSLKRLIWVGKDYDFLTALHIPEKLFYPTTASLLEDLHN
ISIEKESVLIKGARIFQFEKVVERLALRSHGTVLDINLNALTNNLMVYRSLIPPQVKLMT
MVKAFSYGSGSFEVANLLQFAKVDYLTVAFADEGVELRSAGITLPIMVLSPDADTFSALI
KHDLEPEVYSMSFLNDFIAFLKDQQIKSYKIHLKLDTGMHRLGFFPEEIPAVIDRLKSQD
QVVVQSFFTHLVASGDPKQDEFTQYQIDTYSQSAKLLEDGLGYNFIRHVANTSGIVRWPE
AHFDMVRLGIGLYGVDMDRKLENLEQVSTLRTTVTQLKELKAGETIGYDRKGVLHRDSKI
ATVKIGYADGYNRRFGQSVGKMQINGKLVPTVGSICMDMCMLDVTDIEVKEGDEVLVFPD
LMQASKDIGTIPYELLVNISGRVKRVYYYE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgataggtaaagttaatgaaatcgtaggggggatggctatcagaattcctaat
tctgatcagcagatcagtgaattagtctacgacagccgaaaaatcagtctgccagaagaa
agtttgttttttgctctatctgccacccgcgatggtcatgaatttattgccgatgcctat
aatcaaggtatccgttcctttataatcagtaaggatgttccatttttaatggacaaaacc
gacgtgaatgtactaaaagtacatgataccttaaaagccctccaagatctggcggcatat
catcgaaaacaattccatttccccataattgggattaccggcagtaatggtaaatccata
gtcaaagcttggttgacacagatgctgagtatagataaaaaggtttaccagagtcccaag
agctataattcgcagatcggtgtggcgctttccctttggaacctgcagggacattatgat
ttggccattattgaggcaggaatcagtgagcccggtgagatggatgcattagcagcaatg
attaaacccgatattggtgtatttaccaatttagggatcgcacatgcccaacacttcaaa
tccaaagaagaaaaacttgcggaaaagcttaagcttttcaaagaaagcaacctattgatt
gcaggttcttcctatgttcctaaagaaatggtagaaaataaaccattattctcctggggg
tatctggaacaagatgatttgcaattgctagaacaacagcaagtagggcaggaaacacag
ttggatattcaatacaagggcagtatccatcaattaaaaatcccctttacagacaaagca
tctattgaaaatgtggtttcctgcgtggctatcatgctaaatttacaatatgatatcgcc
aatatccagcagcgggtttatggattgaaacccctcgagatgcgacttcagttgaaaaaa
gggatcaataacagttctattattgatgattcctattccaacgatcttgcatccttaaaa
atatccttggactttttgcagcagcagaaccaataccaaaaaaagagcatcattctctct
gaaatggatggtctggaagagaacgagaagttccaaaaaaagctgtcagagatattgaac
ggccagtctttgaaaaggctgatctgggtaggtaaggattatgattttctaacagcactc
catattcctgaaaaattgttctacccaacaacggccagcctgctggaagatctccataat
atttccatcgaaaaggaaagcgtgctgatcaaaggtgcccgaatcttccaatttgaaaaa
gtggtggaaagattggcattaagatcgcatggaacggtattggatattaacctcaatgct
ctgaccaataatctgatggtctatcgttctttgataccgccacaggttaaattaatgacc
atggtgaaggctttctcgtatggtagtggaagttttgaggttgccaatctattgcagttt
gcgaaagtagattaccttacagtcgcatttgcagatgaaggggtagaattgcgttctgcg
ggcattacattgcccatcatggtgctcagtccagatgcggataccttttccgcattgatc
aaacatgatttggaacctgaggtctatagcatgtcctttctgaatgatttcatcgccttt
ttaaaagatcaacaaataaaatcctataagatacatctgaaattggatacaggcatgcat
cgtctaggattctttccagaagaaattccagcagttattgatcggttaaaatcacaagat
caggttgtcgttcaatcatttttcacccatttagtcgcatcaggcgatccaaaacaggat
gaatttacgcaatatcagattgatacctattcgcaaagcgcgaaactattggaagatggg
ctaggctataactttatccgccatgttgccaatacatcggggatcgtcagatggcctgag
gcacattttgatatggtccgattgggaattggtttatatggggtggatatggaccggaaa
ttggaaaacttagagcaagtgagtaccttgcgtactacagtgacccaattgaaggaactt
aaggccggagaaacgataggatatgatcgaaaaggtgtcttacaccgcgatagcaagatt
gcaactgtaaagattggctatgcggatggctataatcgcagatttggtcaatcggttggg
aagatgcagatcaatggaaagttggttcctacagtgggtagtatctgcatggacatgtgt
atgctggatgtgacggatatcgaagtgaaggaaggggatgaggtattggttttcccagac
ctgatgcaggcatcaaaagatatcggaactattccctatgaattattggtgaatatttct
ggaagggttaaacgcgtttattattacgaataa
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