Sphingobacterium sp. CZ-2: E3D81_04930
Help
Entry
E3D81_04930 CDS
T06166
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3D81_04930 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphz01007
]
E3D81_04930 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphz03016
]
E3D81_04930 (lysS)
Enzymes [BR:
sphz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
E3D81_04930 (lysS)
Amino acid related enzymes [BR:
sphz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E3D81_04930 (lysS)
Transfer RNA biogenesis [BR:
sphz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E3D81_04930 (lysS)
Prokaryotic type
Other AARSs
E3D81_04930 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
QBR11554
UniProt:
A0A4P7DWH8
LinkDB
All DBs
Position
1082641..1084359
Genome browser
AA seq
572 aa
AA seq
DB search
MSIGLSEQEQQRRLNLQALIDLGINPFPAEKFDVNATAEDILANYERDKINYKNISFAGR
IMSRRVMGSASFLELQDSTGRIQAYVKRDDICPGEDKTLYNTVFKKLLDIGDIVGITGFV
FTTQTGEISIHVQTLTVLTKSLRPLPIVKEADGKTFDAFTDPEQRYRMRYVDLIVNPQNK
DIFVKRTKLFNAMREFFNNAGYMEVETPVLQSIPGGAAARPFITHHNALDIPLYLRIANE
LYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHC
AIAVNGTTKATFNEHEIDFRAPYPRVSMAAAIQQFTGFDITGKSEDEIREAAKGMGIAVN
DTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRHNPELTERFELMVCGKEI
ANAYSELNDPIDQRERFEDQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLI
MFLTNNPSIQEVLFFPQMRPEKAAKVTTVADYVEQGIPEVWVPVLQKMGFLTIESLKEAN
PNKVFNDLGGMRKKMKLDVAMPSKDEVMAWFE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtattggattatcagaacaagaacaacaacgaagattaaatcttcaagctttaatc
gacctcggtattaaccccttccctgcagagaaattcgacgtgaatgctacggcagaagat
atattagccaactacgaaagagataaaataaactataagaacatcagctttgctggtcgt
atcatgagccgtcgtgtgatgggtagtgcatcgttcttagagcttcaggattctactggc
cgtatacaggcttatgtaaagcgcgatgatatctgcccaggagaagacaagaccttatat
aatacggtatttaagaaattattggatatcggcgatatcgtgggtatcacgggttttgtg
ttcacgacacaaactggtgagatttctatccacgtacagaccttaacggtattgaccaaa
tcccttcgtccattgccgattgtaaaagaggcagatggcaagacctttgatgcctttacc
gatccagaacaacgctatcgaatgcgttatgtggatctgatcgtgaacccacagaacaag
gatatctttgtaaagcgtacgaaactgttcaatgcgatgcgtgaattcttcaacaacgcg
ggctatatggaggtggagacaccagtgcttcaatctatccctggaggagctgctgcgcgt
ccgttcatcacgcaccacaatgcattggatattccattgtacttgcgtattgccaatgaa
ctttacttaaaaagattgatcgtcggtggatttgatggggtgtatgagttttccaaaaac
ttccgtaacgaaggaatggaccgtacgcataatcctgaatttaccgcgatggagatctat
gtagcctataaagactacaactggatgatggatttcacagagcgcttattggagcactgt
gcgattgcagtaaacggaacgacaaaagcgacgttcaacgagcatgaaatcgatttccgc
gcgccatatccacgtgtgagcatggctgctgccatccaacagttcacgggttttgatatc
actggaaaatcggaagatgagatccgcgaggctgctaaaggaatgggtattgcggtgaat
gataccatgggtaaaggaaaattgatcgatgagatcttcggcgagaaatgtgaaggaaat
ttcattcagccaacctttatcacggattatccgattgagatgtcgcctttgaccaaaaag
caccgccataatccggaattaacggaacgttttgaattgatggtttgtggtaaggagatt
gcgaatgcatattcggagttgaatgatccgatcgatcagcgtgagcgttttgaggatcag
ttgaagctttcggaaaaaggagatgatgaggcgatgtttatcgatcaggatttcttgaga
gcattggaatatggtatgccgcctacatcgggattgggaatcggaatggataggttgatt
atgttcttgacaaataacccatcgattcaagaggtgttgttcttcccgcagatgcgtccg
gagaaggcagcgaaggtaactactgtggcggattatgtggagcaaggaattccggaggta
tgggtgccggtattgcagaaaatgggatttttgacgattgagagcttgaaagaagcgaat
ccgaataaggtgtttaatgatttaggcgggatgagaaagaagatgaagttggatgtggcg
atgccaagtaaggatgaggtaatggcttggtttgagtaa
DBGET
integrated database retrieval system
