Sphingobacterium sp. CZ-2: E3D81_04940
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Entry
E3D81_04940 CDS
T06166
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphz03036
]
E3D81_04940 (xerD)
Chromosome and associated proteins [BR:
sphz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
E3D81_04940 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QBR11556
UniProt:
A0A4P7DPY9
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All DBs
Position
1087598..1088491
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AA seq
297 aa
AA seq
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MDWENLKKDFKRFLLLERGLSQNSIDAYQNDIVKLQHYCELKEIPLQDIKTRNIQDFLVW
INEFAISAFSQARILSGIKTFFHFLQIEYQWDSNPAELIESPRLSRKIPTVLSIQEIDAL
ISAIDLSAAEGMRNKAILEILYGCGLRVSELCELKISNLFLDVEFIKVEGKGNKERLIPI
GEQAIKFLKIYLEEIRVHQTIKPGMEDYVFLNRRGNPLSRVMIFIIIKDLAEKIRLKKDI
SPHTFRHSFASHLVEGGADLRAVQDMLGHESISTTEIYTHIDKDYLQSIITQYHPRS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaaaatttaaaaaaggatttcaaacgttttctgcttttagaacggggatta
agccaaaatagcattgatgcctaccagaatgatatcgttaaactacagcattactgtgag
ttaaaagagatccctctccaggacatcaagacccgaaatatccaagatttcttggtctgg
atcaatgaatttgccatttcggcctttagccaggccaggatcctatcgggcatcaaaaca
tttttccatttccttcagatcgaataccaatgggatagcaacccagccgaacttattgaa
agtcctcgtctttcccggaagatccctactgtgctcagcatccaggaaattgatgccttg
atctcggcgatcgacctatccgccgcagaagggatgcggaataaggccatcctggaaatc
ctctatggatgtggcttacgggtttcggaactttgtgagctcaagatctccaatttattt
ctggatgtggaattcattaaggtcgaaggaaaaggaaacaaggaaaggttgatccccatt
ggcgagcaggccatcaaatttctaaagatctacctggaagagatcagggtgcaccagacc
atcaaaccggggatggaagattatgttttcttgaaccgtcgcggaaacccattgtcccgg
gtgatgatcttcatcatcatcaaagaccttgcagaaaaaattcgcttgaaaaaggatatc
agtccgcataccttccgacatagctttgcttcccatttggtggaaggcggtgccgacctg
cgtgcggtccaggatatgctcggccatgaaagcatcagcacgaccgaaatctatacgcat
attgataaagattatttacaaagtattattacccaataccatccaagaagttaa
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