Sphingobacterium sp. CZ-2: E3D81_05515
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Entry
E3D81_05515 CDS
T06166
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3D81_05515 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_05515 (ruvB)
Enzymes [BR:
sphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3D81_05515 (ruvB)
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3D81_05515 (ruvB)
RecFOR pathway proteins
E3D81_05515 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
TIP49
AAA_22
NB-ARC
nSTAND3
TsaE
AAA_16
Rad17
AAA_14
MCM
Sigma54_activ_2
AAA_18
Bac_DnaA
AAA_PrkA
RNA_helicase
AAA_33
NPHP3_N
NTPase_1
NACHT
ABC_tran
AAA_28
DUF815
Motif
Other DBs
NCBI-ProteinID:
QBR11660
UniProt:
A0A4P7DTL7
LinkDB
All DBs
Position
complement(1210268..1211290)
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AA seq
340 aa
AA seq
DB search
MNENLDPNPERLSTTDKDLERVLRPQTFDDFTGQAKILENLSIFVKAAKLRGEALDHVLL
HGPPGLGKTTLSHIIANEMGVGIKITSGPVLDKPGDLAGLLTGLDEGDILFIDEIHRLSP
LVEEYLYSAMEDFKIDIMLETGPNARSVQISLNPFTLVGATTRSGLLTAPLRARFGINSR
LQYYDSKLLTDIVMRSAIILKVPISEEGAYEIARRSRGTPRIANALLRRTRDFAQIKGNG
SIDKAIAQFALNALNVDEHGLDEMDNRILMTIIDKFKGGPVGLKTIATAVGEDEGTIEEV
YEPFLIQEGYLMRTSRGRECTELAFRHLGKTNYPKGNTLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaatcttgacccaaatccggagcgtctatcaacgaccgacaaagatctggag
cgcgtactgcgcccccaaacctttgatgatttcactggtcaggctaagatattggaaaat
ctgtcgatctttgtgaaggcagccaagcttcgtggggaggcattggaccatgtattgcta
catggccctccaggacttggaaaaaccaccttatcccatatcatcgccaatgaaatgggg
gtgggcatcaagataacttccggtccggtattggataaacccggggatcttgccggacta
ttaaccggtttggatgagggagacattctattcatcgacgagatacaccgtttaagcccc
ttggtggaagaatatttatattctgccatggaggacttcaaaatcgatatcatgctggaa
acagggcccaatgcgcgttccgtgcagatttccttgaatccatttactttagtcggtgca
accacccgttcgggattgcttaccgccccattacgcgcgcgtttcggtatcaattcccgc
ttacaatactatgattccaaattattgacggatatcgtgatgcgatcagccatcatcctt
aaagttccaatctccgaagaaggagcttatgaaattgcacgtaggagtaggggtacccct
cgtattgccaatgcactgctgcgaagaacccgggattttgcccagatcaaaggaaatggt
tccattgataaagccattgcccagtttgccttgaatgccctaaatgtggatgagcatggt
ttggatgaaatggataatcggatcctgatgaccatcattgataaattcaaaggaggtccg
gtaggcttgaagaccattgcaactgctgttggggaagatgaaggtactattgaggaggtt
tatgaacctttcttgatccaggaaggatacctgatgcgtacttcgcggggaagggaatgt
acggaactggctttccgtcatttgggaaaaaccaattacccaaaaggaaatactcttttt
taa
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