Sphingobacterium sp. CZ-2: E3D81_05870
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Entry
E3D81_05870 CDS
T06166
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_05870
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3D81_05870
Archaeal homologous recombinant proteins
E3D81_05870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
DUF7532
MCPVI
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QBR11725
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All DBs
Position
1288143..1291184
Genome browser
AA seq
1013 aa
AA seq
DB search
MLPLSLSIEGLYSYQEKQTIDFTQLTDAGLFGIFGAVGSGKSSILEAISFALYGDTERLN
KTDKRAYNMMNLKSNQTQIVFEFLNYENRKFRFVAQWKRRKNFEDTTPIERTAYEWKEEA
WIPMESADGALITNLSYPNFRRTIIIPQGQFKEFLELKGKERSEMMKEIFFLNKFDLGPK
VSHLQAANNRKLENLRGALSGFESISAEALEQKKLEVKEAKETLVQTRETYQELLDKVQQ
IQEFKDKQIELQQKQAQFAELQQSKDKIQQQEKELNKYEQTANAFREPLNNLQALNTERE
TLIHKIENLRATKDRQSHEIDVIDREIHAIQSDYLNLNNFRTQVEDYKLILQIKENERKI
EESEVRLAKGTPFVERTKQAELELAAKSQHFEEELEKLKAQKIDSSQLIAMEKWYQQREN
FQQQIQQVKQQSEQCKNDIASELKAFSQEGYHLDNYEDMISKELQLLENQLLQQREQETQ
LQVQAKLSTFANELQSGQACPLCGALDHPQPMVAEHIQEELQKSKDLRKNLEVSRTDFQT
LRQRLSLNAHSLGTRKVQEERLTLDLQRLDSLMENHIQQFNWEGYSTEDPNAFEAQKQKL
KQNEQQILDLEAQIKQTQSELSKTRENIQKYEKELEVIRNEISVFQGVNKQNQNNLQKFQ
FSEFVAQGLDEVKKSKLTLETSVVHIETTYLSLNQKVNTFRTKLAEVVGQYQSAIDQLSG
FNLQLKTRKEQLTKLLQEFRFNDIIEVQQIIQRPLDVENIRQRIQQFYVRLEVLETQIAA
LKDFLVQKTYSEEELETTHALFNLKKEELELQLSLTGGLEKELNHLSVEFGKKEKLLEEF
DALSNRGSNLKTMENLFKGNGFVNYVSGIHLRQMCEMANHRFHRLTRNQLSLTINESNEF
EVIDYLNNGYRRSVKTLSGGQGFQASLCLALALAENIQSLNKADRNFFFIDEGFGTQDAD
SINTVFDTLQYLQQENRVVGIISHVEELKERIPSSVTVTKDLEDGSKINTMNS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgctgccattatcactgagcattgaagggctttactcctatcaggagaagcaaaccata
gattttacccaattaacggatgccggattattcggcatctttggcgctgttggctccgga
aaatcatccattttggaggccatcagttttgccttatacggcgatacggaacggttgaac
aaaaccgacaaacgcgcctacaacatgatgaacctcaaatccaatcaaacacagattgta
tttgaattcctcaattacgagaaccgaaagttccgctttgttgcccaatggaaacggagg
aagaacttcgaggacaccacgcctatcgaacgtaccgcctacgaatggaaagaggaagcc
tggattcccatggaatcggcggatggtgctttgatcactaacctctcctaccccaacttt
cgtcgtacaatcattatcccacaaggacagttcaaggaatttttggagcttaaaggaaag
gaacgttccgaaatgatgaaggaaatcttcttcctgaacaagtttgacctgggaccaaaa
gtatcccatcttcaagctgcgaacaatcgcaaactggaaaacctcagaggagcgctctcc
ggatttgaaagcatctccgcagaagccttggagcagaaaaaactggaagtgaaagaagcg
aaggaaacgttggtgcagacccgcgaaacctatcaggaacttttggataaggtgcagcag
atccaggaattcaaggataagcagatcgaattgcagcaaaaacaagcgcaattcgccgag
ctccagcagagcaaggataaaatacaacagcaggaaaaagagctgaacaaatacgagcaa
acggcaaatgccttccgtgagcctctgaacaacctgcaggcattgaataccgagcgggag
accctgatccataagatcgagaatcttcgtgctacaaaagatcgtcaatcccatgagatc
gatgtgatcgatcgggaaatccatgcgatccaatccgattacctgaaccttaacaatttc
aggacacaggtcgaagattacaaactgatcctacagattaaagagaatgaacgtaagatc
gaggaatcggaagtacgtttggcgaaaggcactccttttgtggaaaggaccaagcaagct
gagttggaactggcagcaaaaagccagcacttcgaagaagagctggaaaagctgaaagcc
caaaaaatagacagcagccaattgattgccatggaaaaatggtatcagcaacgggaaaat
ttccaacagcagatccaacaggtcaaacaacaatcggaacagtgcaaaaacgacatcgca
agcgagctgaaagccttcagtcaggaaggctaccatttggacaattatgaggatatgatt
tccaaagagctgcaattgctggaaaaccagctcctacagcaacgggaacaggaaacacag
cttcaggtgcaggcaaaactgagtacatttgccaatgaactgcaatctgggcaagcttgt
ccgctctgtggcgccttggaccaccctcaacccatggtggcggaacatatccaggaagag
cttcagaaaagtaaagatcttcggaaaaacctggaagtaagccgtactgatttccaaacc
ttaagacaaagacttagcttaaatgcacattcgttgggcacgcgtaaagtacaagaagaa
cggttgacgttggatcttcagcgattggattcgttaatggaaaaccacatccagcagttt
aactgggaaggatattctacagaagatccgaatgcgtttgaggcgcagaaacagaaatta
aaacagaatgagcagcagatccttgatctggaggcccaaataaaacagacgcaatccgaa
ctttcaaaaactcgcgagaatatccagaaatacgaaaaggaattggaagtcattcgcaat
gaaatttccgtttttcagggtgtcaacaagcagaaccagaataatctgcagaaattccaa
ttttcggaatttgtcgcgcagggcttggatgaggtaaaaaagtccaaattgaccttggag
acttcggttgttcatatagaaaccacctatttaagcttgaaccaaaaggtcaacaccttc
cgcacaaaattggcagaggtggtgggtcaataccaatccgctatcgaccagttgagcggt
ttcaaccttcaattgaaaacccgaaaagagcagttgacaaaattattgcaggagttcagg
ttcaatgatattattgaggtgcaacagattatccaacggccattggatgtagaaaatatc
cgtcaacggattcagcaattttatgtccgtttggaggtgttggagacgcagatcgccgct
ttaaaagattttctggttcaaaaaacctactcagaagaggaattggagaccacccatgcc
ctattcaatctgaaaaaagaggaattggaacttcagctttccttaacgggtggattggaa
aaggaattgaaccatctatcggtggagtttggcaagaaagaaaaattattggaggagttt
gatgccttgagcaatcgcggaagcaatctaaagaccatggaaaaccttttcaagggtaat
ggttttgtgaattatgtttcgggaattcatttaaggcagatgtgtgagatggcgaatcat
cgtttccatcgtttgacccggaaccagttgagtctgacgatcaatgaaagcaatgagttt
gaagtgatcgattatttgaacaatggttataggagatcggtaaaaaccctttcaggaggg
caagggttccaggcatccttatgtttggccttagccttggcagaaaacattcaatccttg
aacaaagcggataggaacttcttctttatcgatgagggttttggaacgcaggatgctgat
tccatcaatacggtttttgatacgctgcaatatttgcagcaggaaaaccgcgtggttggg
attatttcgcatgtggaagaactgaaagaaaggataccaagttctgttacggtgaccaag
gaccttgaggatggttccaagatcaatactatgaattcataa
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