Sphingobacterium sp. CZ-2: E3D81_07285
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Entry
E3D81_07285 CDS
T06166
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03420
Nucleotide excision repair
sphz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3D81_07285
03430 Mismatch repair
E3D81_07285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_07285
Enzymes [BR:
sphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3D81_07285
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3D81_07285
MMR (mismatch excision repair)
Other MMR factors
E3D81_07285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_12
AAA_11
DEAD
AAA_22
YecM
Inhibitor_I29
Motif
Other DBs
NCBI-ProteinID:
QBR11976
UniProt:
A0A4P7DQS9
LinkDB
All DBs
Position
complement(1614254..1616530)
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AA seq
758 aa
AA seq
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MDFLAGLNPSQRAAVEQTQGPVMIVAGAGSGKTRVITYRVAHLIQKGVDPFNILVLTFTN
KAAKEMRERIMKVVGQEAKNIWMGTFHSVFARILRVEAELIGYPRNFTIYDTDDTKSLLR
AILKELNLDDKLYNVNHVYGRISSAKNNLISPQEYNKNEAIMAEDIANGRGQLGQIYMTY
AQRCYRAGAMDFDDLLFKTNVLLNKHPDVLYKYQHQFKYLMVDEYQDTNFSQYLIVKRLA
AVNENICVVGDDAQSIYAFRGANIQNILNFQKDYPDVKVYKLEQNYRSTKMIVNAANSII
ANNKNQLEKNVFSDNEDGEKIKVTRAFSDNEEGKIVAEAILQEKSLKTLNFKDFAILYRT
NAQSRSMEEALRKLGVPYKLYGGTSFYQRKEIKDLIGYFRLTFNPNDEEALKRVINYPRR
GIGDTTVDRIMVAADQNQLRLWDVVANAQMFLDGRSAGSVTNFGIMIQSFQAMAKTNTAF
DTAMYIAQHSGILKDLYEDKSVEGLARYENIQELLNGIKEFSEREDLEEKGLDVFMQDIA
LLTNDDNDKDPNADTVSLMTIHASKGLEFPVVFIVGLEENLFPSQLSLNSRSELEEERRL
FYVAVTRAEKKLHLSYATSRYRWGTLNNCEPSRFLDELNPSCLDLDFKPRSSAVGSEDFQ
SERVSWQRKETGDVFSKPKPKVVKTTSILPKAHKPTEGFAPSDTSNLQVGMEVEHERFGF
GKVINLEGNKPDIKATIFFKELGQKQLLLKFAKLRIVE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
ttggattttttagcaggattaaatccttcccagcgagcggctgtcgagcagactcaaggt
ccggtgatgattgtagcaggtgcaggatctggaaagacacgtgtgataacctatcgggtg
gcccatttgattcaaaagggcgttgatccattcaatatattagtattaacctttaccaac
aaggctgcgaaagagatgcgtgagcgtatcatgaaggtggttggtcaagaggcgaagaac
atctggatgggaactttccactccgtttttgcccgtatcctacgggtggaggctgaactg
atcggttatccccgcaattttactatttacgatacagacgataccaagagcttattgcgc
gccatcttgaaagagttgaacctggatgataaactgtacaatgtaaaccatgtatatggt
cggatttcatcagcaaagaataacctgatctctccgcaggaatataataagaacgaagcc
attatggcggaggatatcgccaatggaaggggacaattgggacagatctacatgacctat
gcgcaacgttgttaccgcgccggggccatggattttgacgatctattgttcaagaccaat
gtgctgttgaacaaacatcccgatgtgctgtacaaataccagcatcagttcaaatacctg
atggtggatgagtatcaggataccaacttttcccagtacctgatcgtgaaaagactggca
gcagtgaacgagaatatctgtgtggtaggggatgatgcgcaaagtatctatgcattccgc
ggtgccaatatccagaacatcttgaatttccagaaggattatccggatgtgaaggtctat
aaattggaacagaactaccgttcgaccaagatgatcgtcaatgcagcgaacagcatcatc
gccaacaataagaatcaattagaaaagaatgtattctccgacaatgaggatggagaaaaa
ataaaagttacacgtgctttttcggataatgaagaaggaaagattgttgctgaggccatt
ttgcaggaaaaatcgcttaagaccttaaactttaaggattttgcaatcctatatcgtacc
aatgcgcaatccagatccatggaggaagcccttcgaaagctgggagttccctataaatta
tatggtggaacctccttctaccaacgtaaggaaatcaaggacctgatcgggtatttccga
ttgacctttaacccgaatgatgaagaagccttaaaacgggtgatcaattatcctcgacgc
ggaatcggtgataccaccgtagaccgtatcatggtggctgcagaccagaaccaacttaga
ctctgggatgtggtagccaatgcgcagatgtttttggacggaaggagcgcgggttcagtg
accaattttgggatcatgatccaaagtttccaggcaatggccaaaaccaatacggcattt
gataccgccatgtatatcgcgcaacattccggcatattaaaggatctttacgaggataaa
tctgttgaaggccttgctcgatacgagaatatccaggaattgctgaatggtatcaaggag
ttttcggagagggaggacctggaggaaaaaggcctggatgtgttcatgcaggacattgct
ttattgaccaacgatgacaacgataaggatccaaatgcagatacggtttctttgatgact
atacatgcctctaaaggattggaatttccggtggtattcatcgtaggattggaggagaat
ctatttccatcgcagttgtcactcaattcccgctcggaattagaagaggaacgccgattg
ttctatgtggcagttacacgggcagaaaagaaattgcatctttcctatgccacctcacgc
tatcgttggggaaccttaaataactgtgagccaagtagattcttggatgaattgaaccca
agttgtttggatttggatttcaaaccgcgaagttctgcggttggatccgaggattttcaa
tcagaacgcgtatcttggcagcgaaaagagacaggcgatgtgttttccaaaccgaaacct
aaggtggtgaaaacgacctcgatattgccgaaggcacataaacctaccgaaggttttgcg
ccatcggatacatccaacctgcaagtagggatggaagtggagcatgaaagatttggtttt
gggaaggtgatcaacctggagggaaataaaccggatattaaagcaactatttttttcaaa
gagttgggacagaagcaattgttgcttaaatttgccaaactgagaatcgtggaataa
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