Sphingobacterium sp. CZ-2: E3D81_07670
Help
Entry
E3D81_07670 CDS
T06166
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphz03032
]
E3D81_07670 (gyrB)
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_07670 (gyrB)
Enzymes [BR:
sphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E3D81_07670 (gyrB)
DNA replication proteins [BR:
sphz03032
]
Prokaryotic type
DNA Topoisomerases
E3D81_07670 (gyrB)
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E3D81_07670 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QBR12047
UniProt:
A0A4P7DV06
LinkDB
All DBs
Position
complement(1717926..1719884)
Genome browser
AA seq
652 aa
AA seq
DB search
MSEENKKPSTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGY
CDDIVVTIQKDNAVSVKDNGRGIPTGINKKENKSALELVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTLLRAEVHREGKIFVQEYAQGKPQFDVKEIGESDKTGTIVTFHPDPEI
FTTTIVYNYDTLANRLRELSFLNKGIRLTLIDEREVLEDDSFRQNIFFSEGGLQEFVKFL
DGNRHALIPEPIYVEGIKQGIPVELALQYNDTYAENVHSYVNNINTIEGGSHVAGFRRGL
TRTLKKYADDSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAV
DVAVGEILSAYLEENPREAKQIVQKVIIAAQARAAARKARELVQRKTVMGGSGLPGKLAD
CSDNDPASCEIFFVEGDSAGGTAKQGRDRRTQAIMPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSIGTAEDSKALNTDKLRYHKIIIMTDADVDGSHIATLLLTFYFRYMKELIERG
YVYIATPPLYLVKKGKDFQYAWTEDQRLAAIQRLKGAGKEDSVHVQRYKGLGEMNAEQLW
DTTMDPDKRTLRQVTIENAAECDRIFSMLMGDEVAPRREFIEANARYAKIDI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacaaaaaaccttcaacgtattcagcggataatatccaggttttagag
ggattagaagcggtacgtaagcgtccatctatgtatattggtgatacgggagtaaagggt
ctgcatcacctggtttatgaagtagtcgataactcaattgacgaagctgttgccggttat
tgcgatgacatcgttgtaactatccaaaaagacaacgctgtttcggtaaaagataatggt
cgtggtatccctacaggtatcaacaaaaaagagaataaatcggcattagagctggttatg
acggtattgcacgccggtggtaaattcgataaggatacgtataaggtatctggaggtttg
cacggtgtgggggtttcctgtgtgaatgccctgtcgaccttattgcgtgcagaagttcat
cgtgagggtaagatctttgtgcaggagtatgcacagggtaagccgcaatttgatgtaaag
gagattggtgagagtgacaaaacaggaactattgtaacattccatccggatccggagatc
tttacaacaaccatcgtctataactatgataccttagcaaaccgtttgagagagctttct
ttcttgaacaaagggattcgattgacattgatcgatgagcgtgaggtattggaggatgat
tctttccgccagaatatctttttctcagaaggtggactgcaagaattcgtgaagttcttg
gatggcaatcgccatgccttgatccctgaaccgatctatgtagaaggaatcaaacaaggt
attcccgtagaacttgctttgcaatacaacgatacatatgcggagaatgtacattcttat
gtaaataacatcaataccatcgaaggtggttctcacgtggctggtttccgtagaggtttg
accaggacgttgaagaaatatgccgatgattcaggtttattgaagaacttaaaagtagag
attacaggtgatgacttccgtgagggattgactgcggtaatttctgttaaagttgctgaa
cctcagttcgaggggcagacaaaaaccaaattgggtaactctgaagtaatgggtgcggtg
gatgttgccgttggtgagatcttaagtgcttatttggaggagaatccgagagaggcaaaa
cagatcgtacagaaagtgatcattgctgcccaagcacgtgctgcggctcgtaaagcccgt
gagttggttcaacgtaaaacggttatgggaggttctggtttaccaggtaaactggccgac
tgttcggataatgatccagcgagctgtgagattttcttcgtcgagggagattctgcgggt
ggtacggctaagcaaggtcgcgaccgtagaacgcaggcgatcatgcctttgagaggtaag
atcctaaacgtggaaaaggctatggaacataagatctatgaaaacgaagagatcaagaat
atgttcacagcattaggggttagtattggtaccgccgaggattccaaagcattgaatacc
gacaaacttcgttaccacaagattattattatgacggatgccgatgtcgatggatcgcac
attgcgactttattgttgacattctatttccgttatatgaaggagttgattgagcgtgga
tatgtttatatcgctactcctcctttgtatttagtgaagaaaggtaaggatttccaatat
gcatggacagaagatcagcgtttggccgctattcagcgcttaaaaggtgcgggtaaagag
gatagtgttcatgtgcaaaggtataaaggtcttggtgagatgaacgcggaacaattatgg
gatactacgatggatccggataagcgtacgttgcgtcaggtgacgattgaaaatgctgcg
gaatgtgatcgtattttctcgatgttgatgggcgatgaagttgctcctcgtagggaattt
atcgaagcgaacgcgaggtatgcgaagattgatatttaa
DBGET
integrated database retrieval system
