Sphingobacterium sp. CZ-2: E3D81_07790
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Entry
E3D81_07790 CDS
T06166
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E3D81_07790 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphz01007
]
E3D81_07790 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphz03016
]
E3D81_07790 (aspS)
03029 Mitochondrial biogenesis [BR:
sphz03029
]
E3D81_07790 (aspS)
Enzymes [BR:
sphz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
E3D81_07790 (aspS)
Amino acid related enzymes [BR:
sphz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
E3D81_07790 (aspS)
Transfer RNA biogenesis [BR:
sphz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E3D81_07790 (aspS)
Prokaryotic type
Other AARSs
E3D81_07790 (aspS)
Mitochondrial biogenesis [BR:
sphz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
E3D81_07790 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QBR12070
UniProt:
A0A4P7DUM1
LinkDB
All DBs
Position
1742750..1744492
Genome browser
AA seq
580 aa
AA seq
DB search
MHRTHTCGELRITDLGKTVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNSEDDEALRS
QARELGREYVIKVTGTVIERSSKNSKIPTGEIEIKVSNLEILNESKLPPFTIEDETDGGE
DIRMKYRYLDIRRNPVKNSLLFRHKVAQEVRNYLSSLDFCEVETPYLIKSTPEGARDFIV
PSRMNPGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSF
VEQEDILNVFEGMTRHLLKNIHGIELEQFPRMTFDEAMRTYGNDKPDIRFGMKFGELNAV
AQHKDFAIFNNAELVVGIAVPEAASYTRKQIDELTDWVKRPQVGASGMVYVKCEADGTFK
SSVDKFYDQSDLAKWAEATGAKAGDLILVLSGPANKVRAQLSALRMELGNRLGLRKPDEF
APLWVIDFPLLEWDEDTERYHAMHHPFTSPKVEDMPLLDTDPGKVRANAYDLVLNGNEIG
GGSIRIHDKDMQALMFKHLGFTPEQAQDQFGFLMNAFQYGAPPHGGLAFGLDRLVAILGG
QETIRDFIAFPKNNSGRDVMIDAPATIAKEQLDELGLGIK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaacacatacctgtggcgaattaagaatcacagacttgggaaaaacggtaacc
cttagtgggtgggtacagaaatctcgtgacttgggcggaatgacctttatcgatgttcgt
gatcgatatggcatcacccaattgaccttcaacagtgaggacgacgaggctttacgtagc
caagcacgcgaattgggccgtgagtatgtgatcaaagtgacaggaactgtaattgaacgt
tccagcaagaacagcaaaatccctaccggagagatcgaaataaaggtgagcaatttggaa
atcctgaacgaatccaagctacctcctttcacgatcgaggatgaaaccgatggaggtgaa
gatatccggatgaaataccgttatctggacatccgccgtaacccggtgaagaattccttg
ttattccgtcataaggtagcgcaagaagtaagaaattacctttcttccttggatttctgt
gaggtggaaactccttatttaatcaaatctacccctgagggtgctagggactttattgtt
ccttcccgcatgaacccaggacaattctacgcgttaccacagtcgccgcaaacattcaag
caattattgatggtgggcggattggacaaatatttccagatcgtaaaatgtttccgtgac
gaggaccttcgtgccgacagacagccggagtttacccagatagactgtgaaatgtcattt
gtggaacaagaggatatcctgaatgtatttgaaggaatgacccgtcatcttttgaagaac
atccatgggatcgaattggagcaatttccacgtatgacttttgatgaggccatgcgtacc
tatggtaatgacaagccagatattcgtttcggtatgaaattcggcgaattgaatgcggta
gcacaacataaggatttcgccattttcaataatgcggaattggtggtaggtatcgctgtt
ccagaagcggcatcttatacccgtaaacagatcgatgaactgaccgattgggtaaaacgt
ccgcaggttggtgcttcgggaatggtttatgtgaaatgtgaagcggatggtacatttaaa
tcttccgttgataaattctacgaccaatcggatctggctaaatgggcagaagcgaccggc
gcaaaagctggagatttgatcctggtattatctggtcctgcgaataaagttagagcgcag
ttgagtgccttgcgtatggaattgggtaatcgtttaggattgcgcaaaccagatgaattt
gcaccattatgggtaattgatttcccattgttggaatgggatgaggataccgagcgctat
cacgccatgcatcacccatttacttcacctaaggtagaagacatgcctttgttggatacc
gatcctggaaaagtacgcgcaaatgcttatgacttggtattgaatggaaatgaaatcgga
ggcgggtcgatccgtatccatgataaagatatgcaagccttgatgttcaagcatttagga
tttacgcctgagcaggcacaggaccaattcggtttcttgatgaatgctttccaatacgga
gctcctccacacggtggattggcctttggattggatcgtttggtagctatccttggtggc
caagaaacgatccgtgatttcatcgctttcccgaaaaacaattctggaagggatgtgatg
atcgatgcgccagctaccatcgcgaaagagcaattggacgagttgggtttgggaataaaa
tag
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