Sphingobacterium sp. CZ-2: E3D81_08000
Help
Entry
E3D81_08000 CDS
T06166
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz00020
Citrate cycle (TCA cycle)
sphz00640
Propanoate metabolism
sphz00660
C5-Branched dibasic acid metabolism
sphz00720
Other carbon fixation pathways
sphz01100
Metabolic pathways
sphz01110
Biosynthesis of secondary metabolites
sphz01120
Microbial metabolism in diverse environments
sphz01200
Carbon metabolism
Module
sphz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E3D81_08000 (sucD)
00640 Propanoate metabolism
E3D81_08000 (sucD)
00660 C5-Branched dibasic acid metabolism
E3D81_08000 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E3D81_08000 (sucD)
Enzymes [BR:
sphz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E3D81_08000 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
QBR12108
LinkDB
All DBs
Position
1793652..1794524
Genome browser
AA seq
290 aa
AA seq
DB search
MSVLVNKDSKVIVQGFTGNEGTYHASQMIEYGTNVVGGVTPGKGGQSHLDRPVFNTVQDA
VDATGANVSIIFVPPAFAADAIMEAAAAGIALIVCITEGIPTKDMIQVKSYLSDKNSRLI
GPNCPGIITAEEAKIGIMPGFIFKKGSVGVVSKSGTLTYEAVDQTVKAGLGITTAIGIGG
DPIIGTTTKEAVELLMNDPETKGIIMIGEIGGGMEAEAARWIKENGTKPVVGFIAGQTAP
PGRRMGHAGAIVGGADDTAAAKMAIMRECGIRVVESPAEIGKAIAEELAK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtattagttaataaagattccaaagtaatcgttcaaggttttaccggaaacgaa
ggtacttatcatgcatctcagatgattgagtatggtacaaacgtagttggtggtgttaca
ccaggcaaaggcggacaaagtcacttagaccgtccggtattcaacacggtacaagatgct
gtagatgctactggcgcaaatgtttctattatttttgttccaccagcattcgctgctgat
gcgatcatggaagctgctgctgcaggaatcgctttaattgtatgtatcacagagggtatc
cctacgaaagatatgattcaagtaaaatcttacttgagcgacaaaaactcccgtttaatc
ggtcctaactgtccaggtatcatcactgctgaagaagcgaagatcggtatcatgccagga
tttatcttcaaaaaaggttctgtaggtgttgtttccaaatcaggaacattgacttacgaa
gcggtagatcaaacggtaaaagcaggattaggaattactacagctatcggtatcggtggt
gacccgatcattggtacaacaaccaaagaagcggtagaattattgatgaacgatccagaa
acaaaaggtatcatcatgatcggtgagattggcggtggtatggaagcggaagctgctcgt
tggatcaaagaaaatggtactaaaccagtagttggtttcatcgctggccaaacagcgcct
ccgggacgtcgtatgggtcacgctggtgcaatcgttggtggtgcagatgatactgctgct
gcgaaaatggcgatcatgcgagagtgtggtatccgtgtagtagaatctccagctgaaatc
ggaaaagctatcgctgaagaattagcgaagtaa
DBGET
integrated database retrieval system
