Sphingobacterium sp. CZ-2: E3D81_08345
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Entry
E3D81_08345 CDS
T06166
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E3D81_08345 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_08345 (mutS)
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
E3D81_08345 (mutS)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_22
AAA_27
Motif
Other DBs
NCBI-ProteinID:
QBR12170
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Position
1885616..1888222
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AA seq
868 aa
AA seq
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MAKEKKQTPLMQQYNTIKAKYPGALLLFRVGDFYETFGEDAVKAAKILGIVLTKRGNGTE
SETALAGFPHHSLETYLPKLVRAGQRVAICDQLEDPKQTKTIVKRGVTELVTPGVSYNEN
IVHQKSNNYLASLYTEKSVVGVSFLDISTGEFLVAQGNVGYIDKLLQGFKPTEIILPKKQ
YKEFLEQFGSGYYTYTLDEWPYSGDYAEEQLLKHFEVKSMKGFGVDRMNIGIIAAGVALH
YLNETEHRNLQHISNISRIEEDRYMWLDRFTIRNLELIGSANENASTLSDVLDETSSPMG
ARLLKRWIIMPLKDEKAIQERLQVVEYFHNHRDVRDELIHEIKQVGDLERLISKIGLQKA
NPREIIQLKRALYAVEKLKEMTNASDTESLRMIAEQLNPCLLIREKIEKTVKAEPPVALN
KGNVIEDGVDVDLDKLRKVAFGGKDYLLEIQRRESEATGIPSLKIAFNNVFGYYLEVTNT
HKDKVPDSWIRKQTLVNAERYITEELKEYEEQILGAEEKIQVIENRIYAELLQDIAAYIK
PIQLNAQLIAKLDVLLNFAVIAEKNYYIKPEINNSRVLDIKGGRHPVIEKKLPIGEDYIT
NDTFLDPETQQIIIITGPNMAGKSALLRQTGLIVLMAQIGSFVPAKEASIGIVDKIFTRV
GASDNLSSGESTFMVEMNETASIMNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEYLHG
HPSCQAKTLFATHYHELNELCNSMPRIKNYNVSVKEVNNKVIFLRKLVPGGSEHSFGIHV
AKLAGMPPKLIGRANDILKRLEQERTGGEKIKDSMRKIQKQAYQLQMFAIDDPVLEKIRD
MLNNLDVNTLTPVEALMKLDEIQRLLKN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagagaagaaacaaacccctttaatgcagcaatataataccatcaaggcgaaa
tatcctggtgcccttttgttgtttagagtgggggatttttacgagacgtttggggaggat
gcggtgaaggccgccaaaattttagggattgttctaacaaaacgcggtaatggcaccgaa
tcggaaacggcattggcaggatttccgcaccattccttagagacttatctaccaaaactg
gtgcgtgccggacaacgtgtggcgatatgcgaccaattggaagatcccaaacagaccaaa
accatcgtgaaacgcggggtgaccgaattggtaactccaggtgtttcttacaatgaaaac
atcgttcaccaaaaatcaaacaattaccttgcctccctttataccgaaaaatcggtcgtt
ggagtgtccttcttggatatttcaaccggcgaatttttggtcgcccaagggaatgtaggt
tatatcgataaattgttgcaaggtttcaagccaacggagatcattcttcccaagaagcag
tataaagagtttctggaacagtttggttccggatactatacctataccctggatgaatgg
ccatattctggagattatgccgaggaacagttattgaagcattttgaggtgaaatccatg
aaaggctttggggtagatcgcatgaacatcggcatcattgctgctggtgtggcgctgcat
tacctgaatgaaaccgaacaccgaaatctgcagcatatttccaatatttcccgaatcgag
gaagatcgctacatgtggttggatcgttttacgatccgtaacctggagttgatcggttct
gccaatgaaaatgccagtactctttcggatgtcctggatgaaacatcttcgcctatgggt
gcacgattgttgaaacgctggatcatcatgcctttgaaggatgaaaaggctattcaggag
cgactacaggtggtggaatatttccataaccaccgcgatgtacgtgacgagcttatccat
gagattaagcaggtgggtgatctggaacgcctgatcagtaaaatcggacttcagaaggcg
aatcctcgcgagatcatccaattgaagcgggccttatatgcagtggaaaaactgaaggag
atgaccaatgcttcggatacggaatcgctacggatgatagccgaacagttgaacccttgt
ctccttattcgggaaaagatcgaaaaaacggttaaagccgaacctccggtggcattgaac
aaagggaatgtgatcgaagatggggtggatgtggatctggataagctgcgaaaggtggca
ttcggtggaaaggattaccttttggaaatccaacgtcgggaatcggaggctacgggtatc
ccatcgcttaaaatagctttcaataatgtctttggttattatttagaggtcaccaatacc
cataaagataaagttccggatagttggatccgcaaacagaccttggtcaatgcagaacgc
tacatcaccgaagaacttaaagaatacgaagaacagatcttaggtgccgaggagaaaatc
caggtcatcgaaaataggatctatgccgaattattgcaggatatcgcagcttacatcaag
cccatccagctcaatgcgcaattgatcgccaagttggatgtgttgttgaactttgcggtg
atcgcggaaaagaactattacataaaacctgagatcaataattctcgtgtattggatatc
aaaggcggtagacatcctgtgatcgaaaagaaacttccgattggggaggattacatcacg
aacgatacctttttggatccagaaacgcaacagatcattattattaccggtccgaatatg
gcgggtaaatcggccttgcttcgtcaaacgggcctgattgtattgatggctcagatcgga
agttttgttccagcgaaggaggcaagtattggtattgtcgacaagatctttacccgtgtc
ggggcttcggataatctatcctctggagaatcgacttttatggtggagatgaatgaaacg
gcaagcatcatgaataatctttctgaccgcagtttgatcctcttggatgagattggtcgt
ggaacgagtacctatgatggtatttctatagcctgggctattgcagaatatttgcacggg
catccgagctgtcaggcaaagacgctttttgcgacccattaccatgaattaaatgagctc
tgtaattccatgccccgcattaagaattataatgttagtgtgaaagaggtgaataataag
gtgatcttcctaaggaaattggttcccggaggctctgaacatagctttggtatacatgtc
gcgaaattggcaggtatgccgccgaagttgatcggtcgtgcgaatgatattctgaaacgt
ttggagcaggaacgcaccggcggagaaaagatcaaggatagcatgcggaagatccaaaag
caggcctatcaattgcagatgtttgctattgatgatccggtgctggagaagatcagggat
atgctgaacaacctggacgtgaataccctaacgcctgtggaagccttgatgaaattggat
gagatccaacgtttgctaaagaattag
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