Sphingobacterium sp. CZ-2: E3D81_09895
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Entry
E3D81_09895 CDS
T06166
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphz01011
]
E3D81_09895
Enzymes [BR:
sphz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E3D81_09895
Peptidoglycan biosynthesis and degradation proteins [BR:
sphz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E3D81_09895
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
QBR12454
UniProt:
A0A4P7DYN2
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Position
2230926..2232227
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AA seq
433 aa
AA seq
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MNKKISFLVTLGLGVFLNLGQAQEITTEGSAFSDNIQQAFIVQVEKGKEEIMQQLDSIKS
VNGHAIEFSNEDILIAQRIQRIQKTIPLEYNERVKAYLDKYISRNYKPYMEKLLGLGQYY
FPIYDKIFEEQGIPEEVKYLSVVESSLNPHTVSTSGAVGPWQFIYGTAKIYNLAMDGSYD
ERKDVYSSSYAVTTYLKEAYDEFNDWLLALASYNCGRGCVRRAIQRSGLSSPSYWELSPF
LPKETQNYIPKYVAMTYVLNHAELYGLQPQKTNLLADNKVMMLNKSISLDKLAGSLGLSL
EVLKEFNPAYKKGTVYASNEKPRRLVLPYQANFSDSLIYAALNNQIVVPEIKQEYAVDAK
FSKNIAAAKKSNVKTKPNTVLSYVTHTVRKGDTLSDIAQKYRGATVSRLKSDNNLRGSNL
RIGQKLKVYKGNS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagattagtttcctagtcactttaggcctaggtgtttttctaaatctaggc
caagcccaagaaataaccacagaaggatctgcattttcggataatattcaacaggcattt
attgtccaggttgaaaagggaaaagaggaaatcatgcaacagctggattccattaaatcc
gtaaatggacatgccatcgagttcagtaatgaggatatactcatcgcacagcgcattcag
cgcatccagaaaacaattcccttggaatacaatgaacgggtgaaggcttatctggataaa
tatatctccagaaattataagccttatatggagaagctattgggtttaggccaatattac
ttcccgatatatgataagatctttgaagagcaggggatacctgaagaggtgaagtatctt
tccgttgtggaatcttccctgaatccacataccgtttctacttctggtgcagttggtcct
tggcagtttatctatggaacagccaagatctataacttagccatggatggtagttatgat
gaacgaaaggacgtttattcttcgtcctatgctgttacaacttatctaaaggaagcttac
gacgaatttaatgattggttgttggcattagcctcctataattgtggtaggggctgtgta
aggcgtgctatacaaaggtcgggactctccagtccgagctattgggaattatctccattc
ttacctaaggagacccaaaattacattcctaaatatgtggccatgacttatgttttgaac
catgcagaattatatggtttgcagccgcagaagacaaatctgttagcggataataaggtg
atgatgttgaacaaatccatcagcttggataagcttgctgggagtttgggcttgtctttg
gaggtgttgaaggagtttaatcctgcttataagaaaggaacagtgtatgcttctaatgaa
aaaccaagaagattggttttaccttatcaggcaaacttttctgattcattgatatatgct
gcattgaataaccagattgtagttccggaaataaaacaagaatatgcggttgatgctaaa
ttctctaaaaatattgctgcagcgaagaagtcgaatgttaagacaaaaccgaatacggta
ttaagttatgttactcatacggttaggaagggggatacgttgtcggatatcgcacagaag
tatcgcggggcaacggtaagtagattgaagtcggataataaccttagaggctctaattta
aggattggccagaagctgaaggtttataaaggaaatagttaa
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