Sphingobacterium sp. CZ-2: E3D81_11515
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Entry
E3D81_11515 CDS
T06166
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03030
DNA replication
sphz03430
Mismatch repair
sphz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3D81_11515
03430 Mismatch repair
E3D81_11515
03440 Homologous recombination
E3D81_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphz03032
]
E3D81_11515
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_11515
Enzymes [BR:
sphz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3D81_11515
DNA replication proteins [BR:
sphz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3D81_11515
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3D81_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_5
AAA_14
AAA_30
Rad17
AAA_2
AAA_24
AAA_19
AAA_18
AAA_7
DNA_pol3_delta_C
RNA_helicase
PIF1
AAA_33
AAA_16
VapE-like_dom
nSTAND3
Mg_chelatase
dNK
AAA_assoc_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
QBR12753
UniProt:
A0A4V1B3C1
LinkDB
All DBs
Position
2600063..2601880
Genome browser
AA seq
605 aa
AA seq
DB search
MDNFIVSARKYRPVTFDSVVGQQHITGTLKNAIHNQQLAQAFLFCGPRGVGKTTCARILA
KTINCENISENVEACGTCDSCKSFQNGNSFSIHELDAASNNSVEDIRSLIDQVRIPPQTG
KYKIYIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
KVEDMANHLAAIASKEGVTFEADGLHVIAQKADGGLRDALSIFDQIVSFSNKNLTYKAVI
DNLNILDYDYFFQILDAVNKEDAANVLLTFDQILNKGFDAGHFIAGLSSHIRNLLVTKDP
STLKLLETSENVKKRYLDQSQLISSGILLSALNISNQCEVNYRTSKNQRLQVELALLKMC
HLASAIQLANHGISANAELKKKLPESGLSNTAQVASVAAPAGQPKESPAINHAKPVPSAF
VAPTPEKKAPVEQAAPAPAPTQSAPSVNGWGQIKPSIAVPDLKKIFLPKSETDKEENELV
QGSEFLEVTTNAFLGKWNAFAEKLKSENKLTLFTIMTANTPTLQGTKILVEVENMVQMDG
LKLGKIDILNYLRVQLRNFALEIEGVMVEKSKERKPYTSQEKYQAMLAKNPALEQLRKTF
DLGLS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggataattttattgtttctgcgcggaaatatagaccggttactttcgattcggttgtt
ggccagcaacacatcacaggtactttaaaaaatgcaattcacaaccaacaattagcccag
gcattcttgttttgtggtcctcgtggtgttggtaaaacaacctgtgcccgcatcctagca
aaaacaataaactgtgagaatatttccgagaatgtggaagcttgtggaacctgtgattcc
tgtaaatctttccagaacggtaattccttcagtatccatgaattggatgccgcctcgaac
aactcggtggaagatatccgatctttgatcgatcaggtgcgcattccgccccaaaccggg
aaatataagatctatatcatcgatgaggtgcacatgctttcccaacaggccttcaatgct
tttttgaagacactggaagagccaccttcctacgccatctttattttggcgaccaccgaa
aaacataagattctccctaccattctatcccgttgtcagatatttgatttcaataggatc
aaggtagaggatatggcaaaccatctggccgcgattgcctccaaagaaggagtgactttt
gaagctgatggattacatgtcattgcccaaaaagcagatggtggtttaagggatgcctta
tccatatttgaccagatcgtcagcttctctaataaaaacttgacctacaaagccgtaatt
gataatctgaacatcttggattatgattatttctttcagattttggatgcggtgaataaa
gaggatgcagcaaatgtattattgacctttgatcagatcctgaataagggatttgatgca
ggtcacttcattgcagggttgtcctcgcatatcagaaatcttttggtcacaaaagatcca
tctaccctgaaattattggaaaccagtgagaatgtgaagaaacgttatcttgatcaatct
cagttgatttccagtggtatactcttgtctgcattgaatatttccaatcaatgcgaagtc
aattacaggaccagtaagaaccaacggttacaagtggaattggccttactcaaaatgtgc
catttggccagtgccattcagttagctaaccatgggatatcagcaaatgctgaactaaaa
aaaaaactccctgagtcagggttaagcaatacagcgcaagtagcgtcagtagcagctcca
gctggtcagccgaaagaatctccagcgattaatcatgctaagccggtcccatccgcattt
gttgctccaacccctgaaaaaaaagctcctgtggagcaagcagcgcctgcgcctgcacct
acgcagtcagccccttctgttaatggttggggacagataaagccatccatagcggtgcct
gacctgaaaaaaatattcctgcccaaaagcgaaacagataaggaagagaatgaacttgtc
caagggtcagaatttctggaagtgaccaccaatgcttttcttgggaaatggaatgccttt
gcggagaaattaaaatccgaaaataaacttaccttatttacgatcatgactgccaatacg
cccacccttcagggaacgaaaatcctggtagaggtagaaaatatggtgcagatggatgga
ttgaaactcggtaagatcgatatcctgaattacctacgggttcagctccgaaattttgcc
ttggaaattgaaggcgtgatggtggaaaagtcgaaagaaagaaagccttatacctctcaa
gagaaataccaagccatgcttgccaagaatccggccttggaacaattgcgaaaaacattt
gatttagggcttagctaa
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