Sphingobacterium sp. CZ-2: E3D81_12505
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Entry
E3D81_12505 CDS
T06166
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_12505
Enzymes [BR:
sphz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E3D81_12505
DNA repair and recombination proteins [BR:
sphz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E3D81_12505
Prokaryotic type
E3D81_12505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBR12935
UniProt:
A0A4P7DXY5
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Position
2841760..2843067
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AA seq
435 aa
AA seq
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MDSASPIHIFWFRRDLRIEDNVGLSEALKDGLPVLPIFIFDTDILSRLEDPYDRRVDFIH
QAVAALKASFQKSGSSLKVFHGNPLAIFKDLIAEYRVEKVYWNRDYEPDALKRDQEIISL
LENDQIKWKSFKDQVIFEGNEVLKSNGQPYTVYTPYAKRWRAKLDQEGLDFHLAKLENLL
TFGDEPYFSLEELGFQKTDMEYSEPILDLEQIQQYDKLRDYPAQDGSTKIGIHLRFGTIS
IRECVKVALENNATWLSELIWREFFMQILYHFPRVVHESFKREYDQIAWRNNPAEFALWC
AGETGYPLVDAGMRELNSTGFMHNRVRMLVASFLAKHLLIDWRWGEAYFASKLNDYELAS
NNGNWQWAAGCGCDAAPYFRIFNPSIQQQKFDRQTEYIHKWLDEKAYTAVSPMVDHGFAR
ERAIATYKKGLTAAK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcatcgcctattcatattttttggtttcggagagatttaagaatagaagat
aacgtaggtttatctgaagccctaaaagacggcttacctgtattgcccatctttattttt
gatacggatatattatcacggttggaagatccctatgatcgtcgagtggattttatacat
caagcagttgctgctttaaaagcttcatttcaaaaatcgggttccagtctgaaggtcttt
cacggaaatcccttagcgatattcaaagatttgatagctgaatatcgagtagaaaaggtg
tattggaatcgggactatgaaccggatgccctgaagagggatcaggaaataatttcattg
ttggaaaacgatcagatcaaatggaaatcctttaaagaccaggttatttttgaaggcaat
gaggtgttgaaatccaatggccaaccttatacggtctatactccctatgcgaaaagatgg
cgcgcaaagttggatcaggaaggattggatttccatctagcaaaactggaaaatctcttg
acctttggagatgaaccttatttcagcctagaggaattgggtttccaaaaaactgatatg
gagtattccgaacctattttagatttggagcagatccagcaatacgataagcttcgggat
tatccggctcaggatggcagcacaaaaatcgggatacatcttcggtttggaaccatcagc
attcgggaatgtgttaaggttgctttggaaaataatgcgacttggctttcggaattgatt
tggcgggagttttttatgcagatcctctatcattttccaagagtggtccatgaaagtttc
aaacgagaatatgatcagatcgcgtggcggaataatcctgcagaatttgctttatggtgt
gccggcgaaacgggctatcccttagttgatgcaggaatgcgggaactgaacagtacaggt
tttatgcacaatagagtgaggatgttggtggctagctttctggcaaaacatctgctgatc
gattggcgatggggggaagcctattttgcgagtaaacttaatgattatgaattagcatcc
aataacggtaactggcaatgggcggcaggatgcggttgtgatgccgcgccctattttcgg
atttttaaccccagtattcaacaacagaaattcgataggcagaccgagtatatccataag
tggttagacgaaaaagcctatacagctgttagccccatggtagatcatggttttgcacga
gaaagagcaatcgctacctacaaaaagggattaacagccgcgaagtaa
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