Sphingobacterium sp. CZ-2: E3D81_14815
Help
Entry
E3D81_14815 CDS
T06166
Name
(GenBank) Dna2/Cas4 domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphz
Sphingobacterium sp. CZ-2
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_14815
Enzymes [BR:
sphz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3D81_14815
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E3D81_14815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
AAA_30
TyeA
Hormone_3
Motif
Other DBs
NCBI-ProteinID:
QBR13375
LinkDB
All DBs
Position
3382921..3386412
Genome browser
AA seq
1163 aa
AA seq
DB search
MFFFILCIQHIPRTSCKKGRKDKNLFPIIKANRYIHHINPQHPMQEKAPLKIVKASAGSG
KTFSLTVHYLSLLLAKESNYREILAVTFTNKATAEMKERILSVLQGLATGNPARKIEDYR
QILLEEHPQWDAHALQEKAQRIYRRILHDYSHFSVSTIDGFSQKVIRSFTYELNLDAGYA
IEMNTNKVKRDLTIMLNQLLDEKPELLEWIIAYAEQKIGNNENWNYRNQLMSLAGLIFSE
NFQEFDGYILSADSNRIFNLLNKEVSEKTSNFLDALSAAIEQFNQTYRSLGIDESELVQK
SRNKLVSASKVNPNIHKFSISDLDEKVFQKYDTLVQEPEKIFVDQDKNYRTDLVQAMQPA
LDILMELRGIFPSYIAYHSVQGNLYFLRLLKEMSDLLSQWRKENGAQLISDAQILLNKIG
IDDQQDPTFIWEKIGNRFNYFLFDEFQDTSRIQWKNYSPLLLNALANATGTLNEHLIVGD
VKQSIYRWRNGDWRILLQQVEKQVVDNFHLQPQQLEQFIHNGTLQTNFRSLPNIIKLNNY
LFDKIPSLLQEVLNNKVLESLSGDSWAWWQETGNDQMLIKAYQDTEQQIPEHLLGDDNPQ
GSIEINYFPVEHGRFRKNQVMDASVDTLCQKIGEWISSGRYQAKQIGILLRSNAQARLLI
QELMRFKNEKQLAFEVISGDALTLISNHAVNLLVETFRALVFQSEKHVIHLANMAYLYQL
AMGNSAIDPKAWLTFKANQIESLNGVLPQPLIENWLALQKMPLVHLTEKLIEIYQVGQEN
SIHLPYLLAFKDMVTQFSSMGERGILQFLEYWDEDGEKAVLPANGKLDAIEVTTIHKSKG
LAYDVVMIPFCSWNLDGMNNGDFWIDVMDSPFQELGKIPVKYNAALGKSIFYKQYFEEML
FNYMDALNTFYVATTRAKEHLYISAPQFKEADAKSANVLNGFEVKNEYISDLLLQTLMDP
QSIFPLEDNQVNIQEIILKKDDGEDQEENKLALTNYPISKELDRALDRSSKRSINNILMM
EEAARYGVLAHEIISAVEKEQDIADLVSQFIEEGIIEEHARPDLMKEIQEVWHHPQINQW
LTQDYKVWNEASIITSEGKTLRPDKVFSKDGETIVLDFKFTKGDYIEHKYQVGTYMDALK
NVGYPAVKGYLYYAKSKELVEVN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttttattttatgtattcaacatatcccccgtacttcatgcaagaagggacgc
aaagataaaaacttatttccaataataaaagcaaaccgttatattcatcacattaatcca
caacaccctatgcaagaaaaagcacccctaaaaatagttaaagcatcggcaggctccgga
aagacattcagcctgaccgtacattacctatctttattgttggccaaggaaagcaattac
cgcgaaatacttgctgtaacctttaccaacaaagcaaccgcggaaatgaaggaaagaatc
ctctccgtgttgcagggcttagcaaccggaaatcccgctaggaaaatcgaggattaccga
cagatattattggaagaacatccccaatgggatgcacatgcccttcaggaaaaagcacaa
cgtatataccgaaggatcttgcacgattactcccacttctctgtgagtaccatcgatggg
ttctcccaaaaagtcatccgaagctttacctatgaattgaatctggatgccggatatgcc
atcgaaatgaacaccaataaggtaaaacgggatctgaccatcatgctgaatcagctcttg
gatgaaaaacccgaactattggaatggatcattgcttatgcggagcaaaaaataggaaac
aatgaaaattggaactatcggaatcaattgatgagtctggccggtcttatattcagtgaa
aatttccaggaatttgatggatacatactttctgcggattccaaccgtattttcaacctc
ttgaacaaagaggtctccgaaaagaccagcaactttctagacgccttaagcgctgccatt
gaacagttcaaccaaacctaccgtagcttgggcatagacgagtccgaacttgtgcagaag
tcacgaaataagctggtctcggccagcaaggtaaatccaaatatccataaattctccatt
tcagatcttgatgaaaaggtcttccagaaatatgacaccttggtgcaagaaccagaaaaa
atatttgttgaccaagataaaaattaccgtacagatttggtacaggccatgcagcctgcc
ttggatatcctcatggaattacgaggtattttcccatcctatatcgcctatcattcggtt
caggggaatctatatttccttcgtttattaaaagagatgagtgatctccttagtcaatgg
cggaaagaaaatggggcgcaattgatttctgatgcgcagattctcctgaacaaaatcgga
attgatgaccaacaggatcctaccttcatctgggaaaagatcggtaaccggttcaattat
ttcctattcgatgaattccaggatacttcccggatccaatggaaaaactacagcccttta
ttgttgaacgccttggccaatgctacaggcaccttgaatgagcacctgatcgtaggcgat
gtcaaacagagcatctaccgatggcggaatggcgattggcggatactgttgcaacaggtg
gaaaaacaggtggtcgacaatttccatcttcagccgcaacagcttgaacagtttatccat
aacggcaccctacagaccaacttccgcagtctgccgaacatcatcaaactgaataactac
ctgttcgataaaatcccctccttattgcaggaggtattgaacaataaggtattggagagt
ctttccggcgattcctgggcttggtggcaggaaacaggcaacgatcagatgttgattaag
gcctatcaagataccgagcagcagattcccgaacatcttttgggggatgataacccacag
ggctccatagaaatcaattatttccctgttgagcatgggcgattcagaaagaaccaagtt
atggatgcttctgtagataccctatgccaaaagatcggcgagtggatcagcagtggtaga
taccaagcaaaacagattgggatcttgttgcgcagcaatgcccaagcgcggttgctgatc
caggaactgatgcgttttaaaaatgaaaagcagctcgcattcgaagtgatttctggagat
gcattgaccctgatatccaaccatgccgtaaatctcttggtagaaacctttcgcgcactg
gttttccaatcggaaaaacatgttatccatctggccaatatggcctacctataccaattg
gctatgggcaactctgccatcgatcccaaagcctggttaacattcaaggctaatcagatc
gaatccttgaatggggttcttcctcagccattgattgaaaattggctggccttgcagaaa
atgcctttggtccatttgaccgaaaagctgatcgagatctatcaggttggacaagaaaac
agcatacaccttccctatttattggctttcaaagatatggtcacccagttttcgagcatg
ggtgaacggggtatcctccagtttttggaatactgggacgaagacggcgagaaggccgtg
ctaccagcaaacggaaagttggatgccatcgaagtcaccaccattcataaatccaaagga
ttggcttatgatgtggtcatgatcccgttctgttcctggaatctggatggcatgaacaat
ggcgatttctggatcgatgtaatggacagccctttccaagagctcggaaaaatccctgta
aaatacaatgccgccttaggaaaatccattttctataagcaatatttcgaggaaatgctc
ttcaactacatggatgccctgaacaccttctatgtggcaaccaccagggcaaaagaacat
ttatatatctcagcaccccaatttaaggaggccgatgccaaatcggccaacgtattgaat
gggtttgaagtcaaaaatgaatacatcagcgatctattgcttcaaacattaatggatcca
caatccatttttcctttggaagataaccaagtcaacatccaggagatcattctgaagaaa
gatgatggcgaagatcaggaagaaaataaactggcattgacgaactacccgatatcgaag
gaattggatagggcactggatcgttccagcaaacggagcatcaataacatcctgatgatg
gaggaagcggcgaggtatggggtccttgcccatgaaatcatctcagccgtagaaaaggag
caggatattgcggacttggtcagccaatttatcgaagagggaattatcgaagaacatgcc
cgtccagatctgatgaaagagatccaggaagtatggcaccatccccagatcaaccaatgg
ctaacccaggactataaggtttggaatgaagccagtattattacctccgaaggaaaaacc
ctacgtccggacaaggtattcagcaaggatggagaaaccattgtattggactttaagttc
accaaaggcgattatatcgaacataaataccaagtaggaacctatatggatgccctcaaa
aatgtaggttacccagcggtcaaaggctatttatattacgccaaatcaaaagaattagta
gaagtaaattaa
DBGET
integrated database retrieval system
