Sphingobacterium sp. CZ-2: E3D81_16995
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Entry
E3D81_16995 CDS
T06166
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3D81_16995 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_16995 (recO)
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3D81_16995 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E3D81_16995 (recO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
STAT_linker
Motif
Other DBs
NCBI-ProteinID:
QBR13785
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Position
3898100..3898816
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AA seq
238 aa
AA seq
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MLIQTKGIPLKITNYSESSVVAQIYTEALGLQSYLINGARKPKAKIPTNMLQPLHLLELV
VYNKEGGSLQRIKEAHQVPTLRSIPLDIVKSSLAMFLNEVLYKVLRHQHSDPQLFHFLEN
AIIWLDESSEGLANFHLVFLLKLSHYLGFRPAISNKPYFDLREGVFRSVLPGHVQVIQEP
YSQILRDILQTNFNDCNKIKLNKEDRSYLLQKIIDYYRLHTENFGELNALYILEEIFS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccaaaccaagggtattccattaaagatcaccaattattcggagagctctgtc
gttgcacagatttatacagaagcactcgggcttcaatcgtatttaataaatggcgctcgg
aagcctaaggccaagattccaacgaatatgctgcaacccttgcatttattggaattggtg
gtctataataaagagggtggcagcctgcaacggataaaagaggcgcatcaggtgcctacc
ttacgatccattcctttggatatcgtaaaaagttccctggccatgttcctcaatgaggtt
ttatataaggtgctgcgtcatcagcattccgatccacaattatttcattttctggaaaac
gccatcatctggttggatgaaagttctgaaggacttgccaacttccatctggtattcctc
ctgaaattgagccattacctcggctttagaccggccatcagcaataaaccttattttgat
cttcgagagggggtatttaggtcggttttgcctgggcatgtacaggtcattcaggaacct
tacagccagattctaagggatatactgcaaacaaattttaacgattgtaacaaaataaaa
ctaaataaagaggatcgatcgtatttattacagaaaataatcgattattatcgtttgcat
acggagaattttggagaattgaatgctttgtacatcttggaggaaatctttagttaa
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