Sphingobacterium sp. CZ-2: E3D81_17130
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Entry
E3D81_17130 CDS
T06166
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sphz
Sphingobacterium sp. CZ-2
Pathway
sphz03030
DNA replication
sphz03430
Mismatch repair
sphz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3D81_17130
03430 Mismatch repair
E3D81_17130
03440 Homologous recombination
E3D81_17130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphz03032
]
E3D81_17130
03400 DNA repair and recombination proteins [BR:
sphz03400
]
E3D81_17130
Enzymes [BR:
sphz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3D81_17130
DNA replication proteins [BR:
sphz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3D81_17130
DNA repair and recombination proteins [BR:
sphz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3D81_17130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
NSUN5_N
Motif
Other DBs
NCBI-ProteinID:
QBR13968
LinkDB
All DBs
Position
3920139..3921281
Genome browser
AA seq
380 aa
AA seq
DB search
MQLEKIIGHDALKQQLIATVQENRVSHAQLFLGPEGSGALPLAVAYAQYINCENRSASDS
CGTCASCLKYEKLIHPDLHFSYPFFAKKSEETASTYMEDWRAAFLANPYMGLSYWRNQLE
AENKQANINIAEAHSIIKKLSLKSFEAEYKVLVMWLPEYLDTQGNALLKLIEEPPEKTLF
LLVAENQDKILNTIISRTQLVKVNKLPQEDIAEYLINEKRIDPSRANEIAFIADGNMQSA
FEQLHEEDNTNFDLLIRWFRFIVTDSGLNIIQICEEEISKLGRENQKLFLVYSINVLRQI
VLLNQGMPNLVFLKDAELEFVQKFSEISSLEKLEAAIEMLEKTHYSVERNANPKILFLDL
SLQLVLLFKYNTFPQGTQYI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcagttggagaaaataataggacatgatgcactaaagcaacaattgatcgcgacggtt
caggagaatcgagtgagtcatgcgcagttatttttaggccccgaaggttccggtgcactc
cctcttgccgtggcctatgcccaatatatcaattgcgaaaacagatccgcatctgatagc
tgtggtacatgtgcctcctgcttgaaatatgaaaaactgatccatccggatcttcacttt
tcttatccattctttgctaaaaaatccgaagaaaccgctagcacctatatggaagattgg
cgtgcagcttttctggcgaacccttatatggggcttagctactggaggaaccaattggaa
gccgagaacaaacaggcgaacatcaatattgcggaagcccattccatcatcaaaaaatta
agccttaagtcttttgaggccgaatataaggtcttggtcatgtggctgcccgaatacttg
gatacccagggaaatgcactcttaaaacttatcgaggaaccaccagaaaagaccttgttc
ttgttggtggcagaaaaccaagataagattttgaataccattatctccaggacgcaattg
gtcaaagtgaacaaattgccccaagaggatatcgcggaatacctgatcaacgaaaaaagg
attgacccatcacgggcgaacgagatcgcttttattgctgatgggaacatgcaatccgct
ttcgaacaattgcacgaggaagacaataccaatttcgatctattgatccgatggttcagg
tttatcgtaacggattccggattgaacatcatccagatctgtgaggaagagatcagtaaa
ttgggccgtgagaaccaaaaattgttcttagtgtatagcattaatgtcctaaggcagatc
gtgcttttaaaccaaggaatgcccaatctggtctttttaaaggatgccgaattggaattt
gtacagaagttcagcgagatcagcagcttggaaaaactggaagcagctatcgaaatgctg
gaaaaaacacattattctgtggaaagaaatgcaaatcctaaaatattatttttagattta
tctttgcagttagttttattatttaaatacaatacgttcccccaggggactcaatatata
taa
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