Spirosoma aureum: G8759_25395
Help
Entry
G8759_25395 CDS
T06520
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
spib
Spirosoma aureum
Pathway
spib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8759_25395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spib03019
]
G8759_25395
Enzymes [BR:
spib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G8759_25395
Messenger RNA biogenesis [BR:
spib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G8759_25395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
UvrD-helicase
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QIP15730
UniProt:
A0A6G9ATJ7
LinkDB
All DBs
Position
complement(6392731..6394071)
Genome browser
AA seq
446 aa
AA seq
DB search
MQFTDLLLIDPILKALAEEGYTTPTPIQQQAIPILLSRRDLLGCAQTGTGKTAAFAIPIL
QLLNEERSKNPAAPRRIKTLVLTPTRELAIQIDESFAAYGRHLNLRHTVIFGGVSQHSQV
NTLKSGIDILIATPGRLLDLMSQGIISLRDVQFFVLDEADRMLDMGFIHDVKKIIARLPE
RRQSLFFSATMPPDVAKLADTILNKPAKVEVTPVSSTADTIQQAVYFVGREDKRKLLVHV
LNDKQIASALVFARTKHGADKVAKDLLKAGIQAEAIHGNKSQNARQRALSNFKSRQTRVL
VATDIAARGIDVDELSHVINYELPNIPETYVHRIGRTGRAGNDGIALSFCDQEETDFLKD
IHKLIGKRVPVIEDHPYVLDISVSTVTPAQPRQGQGRNGGGNRGGQGRGNGSSNNNSFRR
GTSSADSTNSRSGSNNNRRFGNSGRS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaccgatttattattaattgatccgatcctgaaggcacttgccgaagaagga
tacactaccccgacacccattcagcagcaagccatacccattttgttgagccgccgggat
ttgctgggatgcgcccagactggtaccggtaaaacggctgcttttgcgattccaattctg
caattgcttaacgaagagcgtagcaaaaatccagctgccccccgtcgtattaaaacactg
gtattgacaccaacccgcgaattagccattcagatagacgagagctttgctgcctatggc
cgccatctgaaccttcgtcatacggttattttcggcggtgtttcccaacattcgcaggta
aataccctgaaaagcggtatcgatattctgatcgctacgcctggtcgtttgctcgacctg
atgagtcagggtatcatttcgctccgtgatgtgcagttttttgtccttgatgaggccgac
cggatgctcgatatgggtttcatccatgacgttaaaaagattatcgcccgtttacctgaa
cgtcgtcagtcgctgtttttctcggcaacaatgccgcccgatgtggctaaactggcagac
acaatcctgaacaaaccggctaaagttgaggtcacacccgtatcgtctacggccgatacg
atccagcaggccgtttattttgttgggcgggaagacaagcggaaactgcttgttcatgtg
ctcaacgataagcagattgcatcagctctggtctttgcccgcaccaagcacggagccgat
aaagtagccaaagacttgctgaaagccggaattcaggccgaagccattcacggtaacaaa
tcgcagaatgcccgtcagagggctttgtcaaatttcaaaagccgccagacgagagtgttg
gtcgctacggatattgctgctcgtggtatcgacgttgatgagctctctcacgtgatcaac
tatgaactgccgaatattcctgaaacctacgttcaccgaatcggtcggacaggtcgggct
ggtaatgatggtatcgcgttgtcgttctgcgatcaggaagaaactgattttctgaaggat
attcataagctgatcggtaaacgcgttccggttattgaagaccatccgtatgttcttgat
atatcggtctctactgtaacgcccgcgcaaccccggcaggggcaaggccggaatggtggc
ggtaatcgcggtggtcagggtcgcggtaatggctcatcgaataacaattctttccggcgc
ggtacgagcagtgctgatagcacgaacagtcgcagtggaagcaataacaacaggcggttt
ggtaactcaggtcggagttag
DBGET
integrated database retrieval system
