Spirosoma aureum: G8759_30425
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Entry
G8759_30425 CDS
T06520
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spib
Spirosoma aureum
Pathway
spib03410
Base excision repair
spib03430
Mismatch repair
spib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G8759_30425 (recJ)
03430 Mismatch repair
G8759_30425 (recJ)
03440 Homologous recombination
G8759_30425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spib03400
]
G8759_30425 (recJ)
DNA repair and recombination proteins [BR:
spib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G8759_30425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G8759_30425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G8759_30425 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QIP16651
UniProt:
A0A6G9AVZ5
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All DBs
Position
7618324..7620063
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AA seq
579 aa
AA seq
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MIAQPPPTPKRWITKPFPDSEEQQAAIRSLAQSLNVSPSLAALLVQRSVYTFDEARTFFR
PEIGHLHDPFEMKDMDRAIMRLQMAMLPERQEKILIYGDYDVDGTTSVALVYGFLKKYHP
TIDYYIPDRYKEGYGISQQGIQWAAENGFSLIIALDCGIKSIERVAEAKALGVDFIICDH
HRPGTELPDAAAVLDPKREDCQYPYKELSGCGVGFKLLQAFCLYKEIEMDELYPYLDLVV
VSIASDIVPLTGENRVLAYYGLKYINTTPRTGLKALIKVAGFSRELDITNVVFGLGPRIN
AAGRIQHAKAAVQLLLAEAEEEADDFAMAINKHNNSRREFDTSITEQALAMIRQSESMMS
AKTTVLYDASWHKGVIGIVASRCIEHFHRPTIILTQSHDKAAGSARSVPGFDVYEAIEEC
ADLLEQFGGHTFAAGMTMSVENIDAFRQKFEEVVSRKITEEHLTPLIDIDLPLDFSEIND
KLVRIVKQMGPFGPHNLQPVFMTEDVYLASDPIIMKEKHLKVSLRQGRSGHTLTAIGFGF
AHLADQLRRGEPFSVCYQVEQNFYNGNVSLQLMLKDIRC
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatagcccaaccgccacctacccccaaacgatggatcaccaaaccctttcctgattcg
gaggagcaacaggcagctatcaggtcattagcccaatctcttaatgtcagtccatcactg
gccgccctcctggttcagcgtagcgtatatactttcgacgaagcccggacattcttccgg
cccgaaatcggtcatctgcatgaccctttcgagatgaaggatatggatcgggctattatg
cgcctgcaaatggccatgctccccgaacgtcaggaaaaaatcctgatttatggcgactac
gatgtcgacggcacgacctcggtggcattggtttatggctttttaaaaaaataccatcca
acgatcgattattacattccagatcgatacaaagagggttacggcatttcgcagcagggt
attcagtgggcggcagaaaatggtttctcgctgattattgcgctcgactgtggtattaaa
tccatcgagcgcgtggccgaagccaaagcccttggcgtcgactttattatctgtgatcac
caccgccccggcactgaattgcccgatgcagctgcggtgctggaccccaaacgggaagac
tgccaatatccgtacaaagaattgagtggctgtggtgttggctttaagttattgcaggca
ttctgtctttataaagagattgagatggatgagttatatccttatcttgatctggttgtt
gttagcattgcgtcagatattgtaccgctcacgggcgagaaccgcgttttggcctattac
ggcttaaaatacattaacactacaccgcgtaccggcttgaaagcgctcatcaaagtagca
ggcttttcgcgggaactggacattacaaatgttgtatttgggttaggcccccggatcaat
gccgccggacggattcaacatgccaaagcagccgtacaactcctgcttgccgaagcggaa
gaagaagccgatgattttgcgatggcgatcaataagcacaataacagccgacgtgaattc
gataccagtattacggagcaggcgctggcaatgattcggcaaagcgagtccatgatgagc
gccaaaacaaccgttctctacgatgccagctggcataagggtgttattggtattgtagcc
tctcgatgcatcgagcattttcaccgaccgaccatcattctgacgcagtcgcatgataaa
gccgccggatcggctcgatcggtgccgggattcgacgtttatgaagccattgaggaatgt
gccgacctgctcgaacaattcggcggtcacacctttgcggccgggatgacgatgtcggtt
gagaatatcgacgcgtttcgccaaaaatttgaagaagtggtctcccgtaaaatcacggaa
gaacatcttactccgcttatcgacattgacctgccgctggacttcagcgagattaacgac
aaactggttcggattgtgaaacagatggggccgtttggcccgcacaatttgcagcccgta
ttcatgacggaggatgtgtatttagccagcgatccgattatcatgaaggaaaaacatctg
aaagtcagcctgcgccagggccggtcggggcatacattaacagctattggtttcgggttc
gcacatctggccgatcaacttcgtcgtggagagcctttctcagtctgttatcaggtcgaa
caaaatttttacaacggaaatgtatcgttacagctgatgctgaaagacatacgatgctaa
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