Spirosoma aureum: G8759_31930
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Entry
G8759_31930 CDS
T06520
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spib
Spirosoma aureum
Brite
KEGG Orthology (KO) [BR:
spib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spib03032
]
G8759_31930 (topA)
03400 DNA repair and recombination proteins [BR:
spib03400
]
G8759_31930 (topA)
Enzymes [BR:
spib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G8759_31930 (topA)
DNA replication proteins [BR:
spib03032
]
Prokaryotic type
DNA Topoisomerases
G8759_31930 (topA)
DNA repair and recombination proteins [BR:
spib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G8759_31930 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIP16921
UniProt:
A0A6G9AWQ7
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Position
7947820..7950489
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AA seq
889 aa
AA seq
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MSKNLVIVESPAKAKTIEGYLGKDFTVKSSFGHVRDLPKDGLAVDVLNGFQPSYEISPDK
KKLVSELKSLAKSAEEVWLATDDDREGEAISWHLKEALGLRDNTKRIVFREITKNAIQNA
IKSPRTIDVDLVNAQQARRVLDRLVGYELSPVLWRKIKGGSTGLSAGRVQSVALRLVVER
EREIDKHQSKSSFKVTAQFIVDGSKVLNAELPKNFATAGEARAFLEACIGATFTIKNLEV
KPAKKSPAPPFTTSTLQQESSRKLGYSVDRTMRIAQNLYEAGKISYMRTDSTSLSQEAID
KAKAEIETEFGPKYVQTRQFKTKNESAQEAHEAIRPTNFNDRNAGADRDQKRLYELIWKR
SIASQMADAQLERTTVTISIRFANGAIATVQAHVDDSPFADTPPTQGRSFPNELIAQGEV
IKFDGFLRVYLESKDDEDDEDAKGMLPPLTIGQILNLGQMKATEKFTRPQPRYAEASLVK
KLEEMGIGRPSTYAPTISTIINRGYVIKQDKPGQERKYTEYTLQREQISETSGKETFGSE
KAKLFPTNTGIVVNDFLVEYFPDIVDYQFTATVEKDFDEIADGKMNWQTMLGDFYGDFHK
NIEEIQGSSIVSFKTGARELGIDSRTGKKVSARLGRYGAFAQIGESTDDEKPQYANLREG
QLIETITLQEALDLFALPREVGFFEDKPMTIGIGKFGPYVKHDDKYVSLTKEDDPYSIDA
ERAIQLIQAKRAESISEALGEFEGKPVSTGKGRFGPYVKFEDKYISLPRNESLAGLTLDR
AIELILAKRQIEANKYIKEFPENPAVKVVNGQYGPYLAVGKRNVKIPKDVDPTTLTLEDC
LKLAGDDPAAAKSPAKKAAPAKAKAADATTKKPAAKKTTATVKKTAAKK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacttagtcattgtggagtcgccggcgaaggcgaaaaccatagaaggctat
ctgggtaaggactttacggtgaagtctagcttcggtcacgtacgcgatttgcccaaagat
gggctggctgtcgacgtgctgaacggcttccaaccgtcttacgaaatttcgcccgacaag
aaaaaactggttagtgagctcaaatcgctggctaaatctgccgaagaagtatggctcgct
actgacgatgaccgcgaaggggaagccatttcgtggcatctgaaagaagcgcttggtctg
cgtgataacaccaagcgtattgttttccgcgaaatcacgaagaatgctatccagaacgcc
attaaatcaccacgaacaattgacgttgatttagtgaatgctcagcaagcccgtcgagta
ctcgatcggttggtgggctatgagttgtcgcctgtattatggcgcaaaattaaaggtggc
agtacgggtttgtcggccggtcgtgtccaatcggttgctttaaggctggttgtcgaacgc
gaacgtgaaatcgacaaacaccagtcgaagtcatcatttaaagtaacggcgcaattcatc
gttgatggcagtaaagtcctgaacgccgaactgccgaagaacttcgcaacggctggtgaa
gcacgggcttttctggaagcttgtatcggggctacgttcaccatcaagaatctggaggtg
aaacccgccaagaaatcgcccgctccgccatttacgacctcaacccttcagcaggaatct
tcccgcaaacttggctattctgttgaccgcaccatgcggattgcgcagaatttgtacgaa
gccggtaagatttcgtacatgcggaccgactcaaccagtctgtcgcaggaagctatcgat
aaggcaaaggctgaaattgaaactgaattcggccctaaatacgtacagacccgccagttc
aagaccaagaacgaatcggcgcaagaagcccacgaagccatccggccaacgaacttcaac
gatcgtaatgccggagccgaccgcgatcagaaacgattgtacgagctgatctggaaacga
tcgattgcctcgcaaatggctgatgcgcaactcgaacgcacgacggttacgattagtatc
cgatttgccaatggcgcaatagccactgttcaggctcatgtcgatgacagtccatttgcc
gatactccaccaacacaaggacggagcttccccaatgagcttattgcgcagggagaagtg
atcaagttcgacggctttcttcgcgtttacctcgaatcgaaagacgacgaggacgacgaa
gacgcaaaaggaatgttgccgccgttaaccatcggccagatactgaaccttggtcagatg
aaagctaccgagaagttcacccgcccgcaaccgcgctatgctgaagcatcactggtcaaa
aaactcgaagaaatgggcatcggtcgaccatcgacttatgcaccaactatttcgacgatc
attaaccggggctacgtcatcaaacaggataaaccgggccaggaacgaaaatacacggag
tatacgcttcagcgggaacagatcagtgagacaagtggcaaagaaaccttcggttctgaa
aaagccaagctgtttccaaccaatacggggatcgttgtcaatgactttctggtcgaatat
ttccccgacattgtcgattatcaatttacggcaacagtcgagaaagacttcgacgaaatt
gccgatggaaaaatgaactggcagacaatgctgggagatttctacggtgatttccataag
aacatcgaagaaatccagggctcgtctatcgtttcttttaagaccggggcgcgggagttg
ggtatcgattcccgaacgggtaaaaaagtatcggcccgtttgggtcgctatggtgccttt
gcgcagatcggcgaatctaccgacgacgaaaaaccgcaatatgctaacctgcgtgaaggt
cagcttattgaaacgattacattgcaggaagccctcgacctgtttgctttgccccgcgag
gttggtttctttgaagataaacccatgaccattggtatcggcaagtttgggccttatgtg
aaacacgacgacaagtacgtttcgctaaccaaggaagacgacccttactccatcgatgcc
gaacgggcgattcagttaatccaggccaagcgggcagaatcgatcagcgaagctctgggt
gagtttgaaggcaagccggttagcacgggcaaaggccgtttcgggccatatgttaaattc
gaggataagtacatttcattgcctcgaaatgaatcgctggcgggtttaacactcgatcgt
gcgattgaactgattctggccaagcgacagattgaagcgaataaatacattaaggaattc
ccggaaaatcctgctgtaaaggttgtcaatggccaatatgggccttatctggccgttggg
aagcgtaatgtcaaaatcccgaaagatgttgaccccactacgctaactctggaagactgc
ctgaaactggcgggcgacgatccggctgcggctaagtctcccgctaaaaaagcggccccg
gcaaaagcaaaagcggctgacgcaacgaccaagaaaccagcggctaaaaagacgacggct
actgtaaaaaaaacagcagcgaagaagtag
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