Staphylococcus piscifermentans: SAMEA4384060_0006
Help
Entry
SAMEA4384060_0006 CDS
T06938
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spic03032
]
SAMEA4384060_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_0006 (gyrA)
Enzymes [BR:
spic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMEA4384060_0006 (gyrA)
DNA replication proteins [BR:
spic03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4384060_0006 (gyrA)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA4384060_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
SNU95441
LinkDB
All DBs
Position
1:6443..9115
Genome browser
AA seq
890 aa
AA seq
DB search
MAEFPESRIVERNISSEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTP
DKPYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAA
MRYTEARMTKLATELLRDINKDTIDFIDNYDGTEREPAVLPARFPNLLVNGASGIAVGMA
TNIPPHNMTEVINGVLSLSHNPDITINELMEDIQGPDFPTAGLILGKSGIRRAYETGRGS
IQMRARAEIEERGGGRQRIVVSEIPFQVNKARMIEKIAELARDKKVDGITDLRDETSLRT
GVRVVIDIRKDANASVILNNLYKLTPLQTSFGVNMIALINGRPKLINLKEALVEYLEHQK
VVVRRRTEYNLKKAEDRAHILEGLRIALDHIDEIITTIRDSETDKEAMERLQSRFKLSER
QAQAILDMRLRRLTGLERDKIESEYNDLVAYIEELRAILANDEKLLELVREELTEVRDRF
GDERRSEIQLGGLDTIEDEDLIPEEQIVITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNT
LEEDFVSQIVTMSTHDNVLFFTNKGRVYKLKGYEVPELSRQSKGIPVINAIELENDESIS
TMIAVNDLEKEDAYLVFATKNGIVKRSSLSNFSHINRNGKIAINFREEDELVAVRLTDGT
KDVLLGTSHASLIRFKESKLRPLGRTAAGVKGITLREGDELVGLAVATEDSEDEVLVVTE
NGYGKRTPLDEYRISNRGGKGIKTATITEKNGDIVCITTVTGSEDLMIVTNQGVIIRIDV
SDISQNGRSAQGVRLIRLGDDQFVSTVAKVQEDPEDELEGTSDSEVVPGEGEATVSVEEH
VVETDDDGQTIHTEVDETVDEDGEKEELRQDFMDRVNEDIESVDHEDDEE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcctgaatcaagaatagtagaacgaaatattagtagcgagatgcgtgaa
tcgttcttagattacgcgatgagcgttatcgtatctcgtgctttgcctgacgtcagagat
ggtttgaaaccagtacatcgtcgtattttgtacgggttgaatgaacaaggaatgacgcct
gataaaccgtataagaaatctgcacgtatcgttggggatgtaatgggtaaatatcaccct
cacggcgactcttctatctatgaagcgatggtacgtatggcacaggatttcagctatcgt
taccctcttgttgatggacaagggaactttggttctatggatggcgacggcgctgccgca
atgcgttatacagaagcaagaatgacgaagcttgcaacagaattactgcgtgatatcaac
aaagatacgattgatttcatcgataactatgatggtacagaaagagagccggcagtctta
cctgctcgtttccctaacctgcttgttaacggagcatctggtatcgccgtaggtatggca
accaatattccgccgcataatatgacagaagtcattaacggtgtattaagcttaagtcat
aacccagatattactatcaatgagttgatggaagatattcaaggtcctgacttccctaca
gctggattaattttaggaaaaagtggtatccgccgtgcttatgaaactggtcgtggctct
attcaaatgcgtgcacgtgctgaaatcgaagaacgtggcggcggccgtcaacgtatcgta
gtttctgaaattccattccaagttaataaagcacgaatgattgaaaaaattgctgaatta
gcgcgcgataaaaaagtagacggcattacagacttgcgtgatgaaacaagtttacgtaca
ggcgtacgcgtggtcattgatattcgtaaagatgcaaatgccagcgttattcttaataat
ttatacaaattgacaccacttcaaacatcattcggtgtaaacatgattgccttgatcaac
ggcagaccaaaactaatcaacttaaaagaagcattggttgagtatttagaacaccaaaaa
gtagtagtgcgcagacgtactgaatataatttgaaaaaagcagaagaccgtgcacatatc
ttagaaggtttaagaatcgcattagaccacattgatgaaatcattacgacgattcgtgat
tcagaaacagataaagaagcaatggaacgcttgcaaagtcgtttcaaattatctgaacgc
caagctcaagcaatattagacatgcgtttaagacgtttgacaggcttagaacgggacaaa
atcgaatcagaatacaatgacttagtcgcttatatcgaagaattaagagccattttagcg
aacgatgaaaaattattagaacttgtgcgtgaagaattgactgaagtcagagatcgcttc
ggtgatgaacgtcgctcagaaattcaacttggcggcttagatacaatcgaagatgaagac
ttaattccagaagaacaaattgttattacattaagtcacaataactatattaaacgtctt
ccggtttcaacttatcgtgcacaaaacagaggcggtcgcggcgtacaaggtatgaatact
ttagaagaagactttgtcagccaaatcgtgacaatgagtacccacgacaacgtgttattc
tttacaaataaaggacgcgtttataaattgaaaggttatgaggtgccggaactctcccgt
cagtctaaaggtattccggttattaacgcaatcgaattagaaaatgatgaatccatcagt
acgatgattgcggtaaatgaccttgaaaaagaagatgcttacttagtattcgctactaaa
aacggtatcgttaaacgctcatcactcagcaatttctcacacattaaccgtaatggtaaa
attgcgattaacttccgtgaagaagatgagctcgtagcggtacgtcttacagatggtact
aaggacgtcttacttggaacatcacatgcttcattaatacgcttcaaagaatctaaatta
cgtccattaggccgtacagcagcaggtgtaaaaggtattacattacgtgaaggcgatgaa
ctcgtcggccttgcagttgcgacagaagatagtgaggatgaagtcttagtagtaactgaa
aatggctacggtaaacgtacacctcttgatgagtaccgtatttcaaatcgtggcggtaaa
ggtattaaaactgcaacgattactgagaaaaatggagatattgtttgtatcactacagta
actggcagcgaagaccttatgattgtaactaatcaaggcgttatcattcgaattgatgtc
agcgatatttcccaaaatggacgttctgctcaaggtgtccgtcttatccgcttaggagat
gaccaattcgtttctactgtggctaaagtacaagaagaccctgaagacgaattagaagga
acatctgacagcgaagtggtaccaggtgaaggagaagcaacagtttcagtcgaagaacat
gttgtggaaactgatgatgatggtcaaactatccatactgaagtcgatgaaacagtcgat
gaagatggcgaaaaagaagaattaagacaagactttatggatcgcgtgaatgaagatatt
gaaagcgtggatcatgaagatgacgaagaataa
DBGET
integrated database retrieval system
