Staphylococcus piscifermentans: SAMEA4384060_0034
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Entry
SAMEA4384060_0034 CDS
T06938
Symbol
ddc
Name
(GenBank) pyridoxal-deC
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00350
Tyrosine metabolism
spic00360
Phenylalanine metabolism
spic00380
Tryptophan metabolism
spic01100
Metabolic pathways
spic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
SAMEA4384060_0034 (ddc)
00360 Phenylalanine metabolism
SAMEA4384060_0034 (ddc)
00380 Tryptophan metabolism
SAMEA4384060_0034 (ddc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spic04147
]
SAMEA4384060_0034 (ddc)
Enzymes [BR:
spic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
SAMEA4384060_0034 (ddc)
4.1.1.105 L-tryptophan decarboxylase
SAMEA4384060_0034 (ddc)
Exosome [BR:
spic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SAMEA4384060_0034 (ddc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
SepSecS
Beta_elim_lyase
DnaI_N
DUF5343
LYTB
Motif
Other DBs
NCBI-ProteinID:
SNU95601
LinkDB
All DBs
Position
1:complement(34443..35867)
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AA seq
474 aa
AA seq
DB search
MEMEFNENNIDLETIIRDEVNKYLSRDIGDLPATQQAPLELREKYEKMEVPNKGRDIYEV
LKDLNNEVLNYLYRPNHPRSFSFIPGPASRLSWLGDILTTANNIHASNFANATLPINIER
NLINYLAGKIGYEIKPAGGVFVSGGSMANLTAIVAARDAQVEMEDIKKATVYLTSQTHHS
VGKALHVAGFLKNNIRRIDYNDDFTMNTDSLKAAIDKDIKDGYKPAMVIATAGTTNTGSV
DDFTTLGDICDNYNLWLHVDGAYGLSHILSDKAQHLFKGIERSDSASWDAHKLLFQTYSC
AMVIVKEKNHLLQSFGEDAEYLDDIASDDDVIDPEMLGIELTRPARALKLWITLQVIGED
EIIERIKYGEGLAEYAEEYVSGLDNWRIISHANLSIVNFRYENSDLTEVQNNQLNSMAAQ
KIADSGYAIAYTTVLNNQRVIRLCTTNPLTTHDDIRETINRLDQYINDYNMKDA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaattcaatgagaacaatatcgacttagagacgattatcagagatgaagtc
aataaatatttatccagagatattggagacttacctgcgacacaacaggcaccgcttgaa
ttgagagagaaatatgaaaagatggaagtgccgaataaagggcgagatatttacgaagta
ctcaaagatttaaataatgaagtgctgaattatttatatcgtccgaaccatccgcgttca
ttctcatttataccaggtccagcatcacgcctatcgtggcttggagatattttaacgaca
gcgaacaatatccatgcctcaaattttgctaatgcgacgctgccgatcaatattgagcgt
aatttaattaactacttagcaggaaaaatcggttatgaaatcaaaccggccggcggggtc
tttgtttccggcggttcaatggccaatttaacagctatcgttgcggctagagatgcacaa
gtagaaatggaagatataaaaaaagccaccgtttatctcacatctcaaacccaccattct
gttggcaaagccttgcatgttgcaggcttccttaaaaataatatccgcagaattgattac
aatgacgactttacaatgaatacagacagcttaaaagcagccattgataaagacattaaa
gatggctacaaacctgctatggtaatcgcgactgccggcactactaatacaggttctgtc
gatgatttcaccacacttggagatatttgtgacaactataatctttggctccatgtagat
ggtgcttatggcttgtctcatatcttatccgacaaagcacagcacctatttaaaggcatt
gaacgttcagatagtgctagttgggatgcccacaaactattgttccaaacgtacagctgt
gccatggtgattgtgaaagaaaagaatcatctgctgcaaagctttggcgaagatgctgag
tacttggatgatattgcttcagatgatgatgtgattgatccagaaatgttaggcattgaa
cttacacgtccagcacgtgctttaaaattatggattaccttgcaagtcattggtgaagat
gaaattatcgaacgtattaaatacggtgaaggtttagcagaatatgcagaagaatacgta
tcaggtctcgataactggcgtattatctcacatgctaatctttctattgtaaacttcaga
tatgaaaatagtgatttaaccgaagtacaaaataatcaactcaatagtatggctgctcaa
aaaattgcggattctggttatgccattgcttataccacagtattaaataatcaacgtgtc
attcgtttatgtacaacgaacccattaacgacacacgatgacatcagagaaacaatcaat
cgactcgatcaatatattaatgattacaatatgaaagatgcttaa
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