Staphylococcus piscifermentans: SAMEA4384060_0074
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Entry
SAMEA4384060_0074 CDS
T06938
Name
(GenBank) putative fatty oxidation complex protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00071
Fatty acid degradation
spic00362
Benzoate degradation
spic00650
Butanoate metabolism
spic01100
Metabolic pathways
spic01120
Microbial metabolism in diverse environments
spic01200
Carbon metabolism
spic01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAMEA4384060_0074
09103 Lipid metabolism
00071 Fatty acid degradation
SAMEA4384060_0074
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMEA4384060_0074
Enzymes [BR:
spic01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMEA4384060_0074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
AlaDh_PNT_C
DUF4585
NARF
NAD_Gly3P_dh_N
ApbA
F420_oxidored
NAD_binding_7
Pyr_redox
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
SNU95838
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All DBs
Position
1:complement(82250..84511)
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AA seq
753 aa
AA seq
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MTIRKVTVLGAGTMGAQLAAMLVNAGLKVKLLDIVIDENDPNKISKKAYETITDKKRPLL
FDLSLADNLSYGNFHDDLENDDADLYIEAVKEDLDIKHQVWQAVTKHAKADALFATNTSG
IPINAIAKSFDPADKARFFGLHFFNPPRIMKLVEVIPTTETDPEAIEEVSDFATNVLGKG
VVIAHDVPGFVANRIGTHSMNDVMYRAEQQGFSIPEVDALTGKAIGRPKTGTYALTDLVG
LDIAVSVIKGLQQDPDEAPFFQDAELPNQLFEAGALGRKTKQGFYKKDKEKKQRLVYDPE
TGDYIPVEPPQLPILAEFTKDLKHNLDIIFNSDDKAGKFLWETLRNNFYYSAKNIPKAAD
DFRDIDRAIVWGFNWKLGPFQLWDLMGFDRVKARMEDELGDLPDWLDEVNGSFYEEGETI
ENVTPVSDFVDEEIWNNRDSKLSIANGNQLLLKLQSKNNVITDDFNDDLVEAIDMLENQD
FSSMVIYADGNNFSVGANLYQMKKAYEENAVDEQIAHAIEKLHYSFNRLKYSLKPVVTAV
HGRALGGGCELVLYSPFVVAASETYIGLVEAGVGLLPSGGGLAEMADRILRTSHKADDKQ
ASMSKVLMNIGFAKVSTNAYEAKRYGYLRDTDTIIFNKEKRVEIALKRAQFEADTNYIPT
PKQQYIALGEDFRANAEGQLDAQVKGHFISEHDYNIALRIATVLAGGNLPRNTFVNQRYI
QTLEKENFIELLKTKKTYERISHMLETGKPLRN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcagaaaagtaaccgtcttaggtgccggtacaatgggcgctcaattggcggca
atgttggtcaatgcaggtttaaaagtaaaacttttagacatcgtcatagatgaaaacgat
ccgaacaaaatttccaaaaaagcatatgaaaccattactgataagaaacgtcccctactc
tttgatttaagtttagcggacaacctatcttatggtaatttccatgatgatttagaaaat
gatgatgcagatttatatatcgaagcagtgaaagaagatttagatatcaaacaccaagtg
tggcaagctgtcacaaagcatgcgaaagcagacgctctctttgcgacaaacacatcaggt
atccctatcaatgccattgctaaatcctttgatccagcagataaagcacgtttcttcggg
cttcatttcttcaatccaccacgtatcatgaaattagttgaagtgatacctactacagaa
acagacccagaagcgattgaagaagtcagcgatttcgcaaccaacgtcttaggtaaaggt
gtggtaattgcacatgacgttcctggtttcgtagccaatcgtatcggtacacattctatg
aatgacgtcatgtatcgtgcagaacaacaaggcttctcgattccggaagtggatgcttta
actggtaaagccatcggacgccctaaaaccggtacttatgcactgacagatttagtcggt
ttagatattgctgtttcggttatcaaaggtttgcaacaagatccagatgaagcaccgttt
ttccaagacgcggaactgccgaatcaattgtttgaagcaggtgctttaggccgcaagacg
aaacaaggtttctataaaaaagataaagagaagaaacaacgtctggtttatgatccagaa
acaggcgattatattcctgtcgaaccgcctcaattgccgattctggcagaattcactaaa
gacttgaaacataatttagatattatctttaactctgatgataaagccggaaaattctta
tgggaaacattgcgtaataacttctattattcagctaaaaatattccaaaggcagctgat
gatttcagagatatcgaccgtgccatcgtttggggattcaactggaagctcgggccattc
caactctgggacttaatgggcttcgaccgtgtcaaagcgcgcatggaagacgaactcgga
gacttaccggactggttagatgaagtaaacggcagtttctatgaagaaggagaaaccatt
gaaaatgttacacctgtttctgatttcgtagatgaagagatctggaacaatcgtgattct
aaattatctatcgcaaacggcaatcaattgttattgaaattgcaaagtaagaacaatgtg
attacagacgatttcaatgacgacttagtagaagcaattgatatgctggaaaatcaagat
ttctccagtatggtcatttacgcagacggcaataacttcagcgtcggcgccaacttatat
caaatgaagaaagcttacgaagagaatgcagtagatgaacagatcgcccacgcgattgag
aaattacattacagcttcaaccgcttgaaatacagcttgaaaccagttgtgactgcagtc
catggacgtgcgctcggcggaggttgcgaactcgttctgtactctccattcgtcgtagct
gccagcgaaacttatatcggtttagttgaagccggcgtgggattactgcctagcggaggc
ggcttagctgaaatggccgaccgcatcttgcgtacctctcataaagcagacgataaacaa
gccagcatgtctaaagtattgatgaatatcggatttgcgaaagtctctactaatgcctac
gaagctaaacgctacggctatttaagagacactgacacgattatttttaacaaagaaaaa
cgtgtcgaaatcgcactgaaacgtgcccaattcgaagcagacactaattacattccaaca
cctaagcaacaatacattgcactcggcgaagatttcagagccaacgcagaaggccagtta
gacgcacaagtcaaaggacactttatcagcgagcacgattacaacatcgcattgcgtatc
gccactgtcctagcaggcggaaacttgccacgcaatactttcgtcaatcagcgctacatt
caaactttggaaaaagaaaactttatagagctgctgaaaacgaaaaagacctacgaacgt
atcagccatatgctggaaacaggcaaaccattacgcaactga
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