Staphylococcus piscifermentans: SAMEA4384060_0122
Help
Entry
SAMEA4384060_0122 CDS
T06938
Symbol
dapE_1
Name
(GenBank) putative succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00300
Lysine biosynthesis
spic01100
Metabolic pathways
spic01120
Microbial metabolism in diverse environments
spic01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMEA4384060_0122 (dapE_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spic01002
]
SAMEA4384060_0122 (dapE_1)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SAMEA4384060_0122 (dapE_1)
Peptidases and inhibitors [BR:
spic01002
]
Metallo peptidases
Family M20
SAMEA4384060_0122 (dapE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
OTU1_UBXL
Motif
Other DBs
NCBI-ProteinID:
SNU96055
LinkDB
All DBs
Position
1:140907..141986
Genome browser
AA seq
359 aa
AA seq
DB search
MTKTLDLLKSLIEFDSSTKDAANKTLQFCKAWLEQEGLEPVRLTNDGFDSLICNVGAGEK
RLILNGHVDVVSGNPDQFEPKVEGNKIYGRGSADMKAGVSAMMSALSELQHKDLGNTSVQ
LQLVTDEEIGGKHGANFLTEQGYLGDFVICGEPTQLGIGYQAKGILQIDIHLKGKSAHGS
RPWEGDNAIEKALETYQKILELPFAKESTALFDGPSINLAKIRGGTVYNKVPDEAVISYD
IRFLPGQNEEEILKQIQTITDGEISVHLSGASVINETDNPLIQKLVKEISEETQQPAETI
KLFGQHGFADTRYFARFGTPAVEFGPSGAAWHGDNEYAEINSIETYKNILVKFAESYSK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacattagatttattaaaatcattaattgaatttgacagttcaactaaagat
gcagcgaataaaacacttcaattttgtaaagcatggttggaacaagaagggttagaacca
gtacgattaaccaacgatggatttgattctcttatttgtaacgtaggggcaggagaaaaa
agattaattttgaatggacatgtagatgttgtgagcggtaatcctgatcaatttgaaccc
aaggttgaaggaaataagatttatggacgtggatctgctgatatgaaagcaggtgtaagt
gccatgatgagtgctttgagcgaattacaacataaagatttaggaaatacatctgttcag
ttgcaacttgtaacagatgaggaaattggcggaaaacatggtgctaatttcttaacagaa
caaggctatttgggggattttgtaatctgtggagagcctactcaacttggtattggttat
caagctaaagggatcctgcaaattgatattcatttaaaaggtaaatcagcgcatggcagc
cgcccatgggaaggtgataatgctattgaaaaagcattggaaacttatcaaaaaatatta
gaattaccttttgctaaagaatctacagcattatttgatgggccgtctattaacttggcc
aaaatcagagggggaacagtttataacaaagtaccagatgaagcggtcatttcatatgat
atacgatttttacctggccaaaatgaagaagaaattttaaaacagattcaaaccataacg
gatggtgaaatttcggttcatttatcaggtgcttctgtgataaatgaaacagataatcca
ttaatacaaaagctagtcaaagaaatttctgaggaaactcaacaacctgctgaaactatc
aaattatttggacagcatggatttgcagacacaagatattttgctcgattcggcacacct
gctgttgagttcggtccttctggtgcagcatggcatggggataatgaatatgctgaaatt
aactctatagaaacttacaaaaatatattggtgaaatttgcagagtcttattcaaaataa
DBGET
integrated database retrieval system
