Staphylococcus piscifermentans: SAMEA4384060_0504
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Entry
SAMEA4384060_0504 CDS
T06938
Symbol
capD_3
Name
(GenBank) putative capsular polysaccharide synthesis enzyme
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00541
Biosynthesis of various nucleotide sugars
spic00552
Teichoic acid biosynthesis
spic01100
Metabolic pathways
spic01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAMEA4384060_0504 (capD_3)
00552 Teichoic acid biosynthesis
SAMEA4384060_0504 (capD_3)
Enzymes [BR:
spic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SAMEA4384060_0504 (capD_3)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
adh_short
NAD_binding_4
NAD_binding_10
KR
GFO_IDH_MocA
RHH_8
Motif
Other DBs
NCBI-ProteinID:
SNU98537
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Position
1:596528..598411
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AA seq
627 aa
AA seq
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MSKIPVRQQRLIFFLIIDSLIVAFSVFLSYSILEPYFRGYSLTLLILSSLVLLCSHHIFA
SVFNLYHRAWEYASINEMFVIVKAVTCSMALTVLVVPFFTHEGPFLRLYFITWMMHILLI
GGSRLSWRIFNRTVNRRGRKSKNTLVIGAGAGGSMLVQQMLKRPGMGMEPVLAVDDDPNK
QKLTITEGVKVQGKIEDVPDLVRKYRIKKIIIAIPTLSQKRLREINEVCENLGVTVLKMP
NIEEVMSGELEVNQLKKVEVEDLLGRDPVELDMQLISKELTHQTIMVTGAGGSIGSEICR
QVCRFAPARIILLGHGENSIYLIHQELQKQYGDQIDIVPVIADIQDRARMFKILDHYQPY
VVYHAAAHKHVPMMEYNPSEAIKNNVIGTKNTAEAARAARVSKFVMISTDKAVNPPNVMG
ASKRAAEMIVQSMNEENCKTDFVAVRFGNVLGSRGSVIPLFKKQIEAGGPITVTHPDITR
YFMTIPEAARLVLQAGAIAEGGEVFVLDMGEPVKIVDLAKNLIRLSGYKDGDIEIQFTGL
RPGEKLYEELLDEDEIHPEQVYEKIYRGKVETMKNDDVLRILDEIIHSKDYKQKLIDLAN
HRYEDKNGKVDAQDEGNDDIPPFRVIN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaaatacctgtcagacagcagcgtctgatattctttttaattatagattcactg
attgttgcattttctgtctttttaagttattcgattctagaaccatactttcgtggttat
tcattaacattattaatcttatcatcattagttttactatgctcgcaccatatttttgcg
agtgttttcaatttatatcatcgtgcatgggagtacgccagtattaatgaaatgtttgtc
attgtcaaagcagtaacctgttcaatggccttgaccgtactggtcgttccctttttcacg
catgaaggtccatttttgagattgtattttattacatggatgatgcatattctgttgatc
ggaggttcaagactatcttggagaatattcaatagaacagttaatcgccgaggacgaaaa
tcaaaaaacactttagttatcggagcaggtgcaggtggttcaatgctggttcaacaaatg
ttgaaacgtccaggtatgggcatggaacctgtactcgcagtcgatgatgatccaaataaa
cagaaattaacgattacagaaggcgtgaaagttcaaggtaaaattgaagatgtacctgat
ttagtacgcaaatatcgtattaagaaaattatcattgcaattccgacactttctcaaaaa
cgcttacgtgaaattaatgaggtttgcgaaaatctcggtgttactgtattgaaaatgccg
aatatcgaagaagtcatgtcgggcgaactcgaagtcaatcaattgaagaaagtcgaagtt
gaagatttactcggacgtgatccggtggaattagacatgcagttgatttctaaagaattg
acacatcaaacaattatggtaaccggtgcaggcggttcaatcggttcagaaatctgtcgc
caagtttgccgcttcgcacctgcacgtattatcttacttggccacggtgaaaacagtatt
tatctcattcatcaagagctgcagaaacaatatggcgaccaaattgatattgtgccagtg
attgccgatattcaagatagagcgcgtatgtttaagattctagatcattatcaaccttat
gtggtctatcacgcagcagcacataaacatgtgccaatgatggaatacaatccaagtgaa
gccattaaaaataacgttataggtactaaaaatacagcagaagcagcacgtgcggccaga
gtcagcaaattcgttatgatttcaaccgacaaagcagtcaacccgccgaatgtcatgggc
gcttctaaacgtgcggccgaaatgattgttcaaagcatgaacgaagagaattgtaagacc
gactttgtagcagtgcgcttcggtaatgtgctcggctcccgtggttcagttattccatta
ttcaagaaacaaattgaagcgggcggtccgattacagtgacacatcctgacatcacacgc
tacttcatgacgattccagaggcggcacgacttgtattgcaagccggcgcaattgcagaa
ggcggagaagtcttcgtactcgatatgggtgaaccagtgaaaattgtagatttagccaaa
aacttaattcgcttgagcggatacaaagacggcgacatcgaaatccagtttaccggttta
cgaccaggagagaaactttacgaagaactcctcgacgaagacgaaatacacccagaacaa
gtctatgaaaaaatctatcgcggtaaagtagaaacaatgaaaaacgatgacgtactacgt
atcctcgatgaaatcattcatagcaaagactacaaacaaaaactgatcgacctcgccaac
catcgctacgaagataaaaacggcaaagtcgacgcacaagatgagggcaacgacgatatc
ccgccctttcgcgtaatcaactaa
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