Staphylococcus piscifermentans: SAMEA4384060_0922
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Entry
SAMEA4384060_0922 CDS
T06938
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00260
Glycine, serine and threonine metabolism
spic00460
Cyanoamino acid metabolism
spic00630
Glyoxylate and dicarboxylate metabolism
spic00670
One carbon pool by folate
spic00680
Methane metabolism
spic01100
Metabolic pathways
spic01110
Biosynthesis of secondary metabolites
spic01120
Microbial metabolism in diverse environments
spic01200
Carbon metabolism
spic01230
Biosynthesis of amino acids
spic01240
Biosynthesis of cofactors
spic04981
Folate transport and metabolism
Module
spic_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMEA4384060_0922 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SAMEA4384060_0922 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA4384060_0922 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMEA4384060_0922 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMEA4384060_0922 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMEA4384060_0922 (glyA)
Enzymes [BR:
spic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMEA4384060_0922 (glyA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
SNV00910
LinkDB
All DBs
Position
1:1003074..1004312
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AA seq
412 aa
AA seq
DB search
MSFIEKEDKAVFEAIQNEYNRQNNNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCQYVDVTETLAIERAKELFGAEHVNVQPHSGSQANMAVYLVALDYGDTVLGMNLSHG
GHLTHGAKVNFSGKFYNFVEYGVDKETERIDYEEVRRLAQENKPKLIVAGASAYPREIDF
KKFKEIADEVGAKLMVDMAHIAGLVAAGLHQNPVDYADFVTTTTHKTLRGPRGGMILTKE
EYAKQIDKTIFPGIQGGPLEHVIAAKAVAFGEALNPDFKDYQEQVIKNAKVLAETLVKEG
FRVVSGGTDNHLVAVDVKGSFGITGKEAEEALDEVGITCNKNTIPFDQEKPFVTSGLRLG
TPAATTRGFQEADFEEVAKIISLVVQNPKNEAKLKEASDRVAALTSKHPLYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttatcgaaaaggaagacaaagcagtatttgaagcaattcaaaatgaatacaac
cgccagaataacaacattgaacttattgcatctgaaaactttgtatctgaagcagttatg
gaagcacaaggctcagtattaacgaataagtatgctgaaggttatcctggtcgccgctat
tatggtggttgccaatatgtcgatgttactgaaacattagcaattgaacgtgcgaaagaa
ctattcggtgctgaacatgtaaacgttcaaccgcactcaggttctcaagccaatatggca
gtttacttagtagcattagattacggcgatactgtattaggtatgaatttaagccatgga
ggccatttaactcatggtgccaaagtgaatttcagcggtaagttctacaactttgttgaa
tatggagtagataaagaaacagaacgtattgactatgaagaagtacgtcgtcttgctcaa
gaaaacaaacctaagttaattgttgcaggcgcatctgcttatcctcgtgaaatcgacttc
aagaaattcaaagaaattgctgacgaagtcggtgctaaactaatggtagatatggcacat
atcgctggtcttgtggcagccggattgcatcaaaatcctgttgattatgcagactttgtt
actacaacaacacataagactctaagaggccctcgtggcggaatgattcttactaaagaa
gaatatgctaaacaaattgataaaacgatcttcccaggtattcaaggcggtccgttagag
cacgtaatcgctgcaaaagcagtagcatttggtgaagcattgaatcctgatttcaaagat
tatcaagaacaagtgattaagaatgcgaaagtcttagctgaaacattggttaaagaaggc
ttcagagttgtttcaggtggaactgataaccacttagtagctgttgatgttaaaggttca
ttcggtattacagggaaagaagcggaagaagctcttgatgaagtaggtatcacttgtaat
aagaacaccattcctttcgatcaagaaaaacctttcgttacaagtggtttgcgcttaggt
acaccagcagctacaacacggggattccaagaggcagattttgaagaagtagctaaaatt
attagcttagttgttcaaaatcctaaaaatgaagcgaaattaaaagaagcaagtgatcgt
gtagcagctttgacttcaaaacatccattatataaataa
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