Staphylococcus piscifermentans: SAMEA4384060_0972
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Entry
SAMEA4384060_0972 CDS
T06938
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spic03021
]
SAMEA4384060_0972 (sigB)
Transcription machinery [BR:
spic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA4384060_0972 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
GerE
Sigma70_ECF
KORA
HTH_16
HTH_3
IF2_N
HTH_38
DUF2316
PI31_Prot_N
PhyR_sigma-like
EF-hand_15
Motif
Other DBs
NCBI-ProteinID:
SNV01188
LinkDB
All DBs
Position
1:1044877..1045647
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AA seq
256 aa
AA seq
DB search
MAKESKSVNDISPEQINEWIRQHQNDENTGAQDKLVKHYQKLIESLAFKYSKGQSHHEDL
VQVGMVGLIGAINRFDINFGRKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KTTDELTNELERSPSISEIAERLEVTDEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGEQEGGYDLTEKRMILERILPILTDREREIIQCTFIEGLSQKETGERIGLSQMHVS
RLQRNAIKKLQQAAKK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagtcgaaatcagttaacgatatttcacctgaacaaatcaatgagtggatc
agacaacatcaaaatgatgaaaatacaggcgcccaagataagctcgttaaacattatcaa
aagctgattgaatctttagcatttaaatattccaaggggcaatcacatcatgaagattta
gtacaagtcggcatggtagggttaatcggagcaattaatcgttttgacattaacttcgga
agaaagttcgaagcgttcttggtgccgactgtaataggtgaaataaaacgatatttaaga
gataagacttggagtgttcatgttccaagaagaattaaagaaattggaccaagaattaag
aaaacgacagatgaattaaccaacgaacttgaacgttcgccatcaattagtgaaattgct
gaaagattagaagtaacggacgaagaagtattagaagcgatggaaatggggcaaagttat
aatgccttgagtgtagatcactctattgaagcggataaagatggttcaaccgtaacatta
ttagatataatgggcgaacaagaaggcggttacgatttaactgagaaacgtatgattcta
gaaagaatcttacctattttgactgacagagaaagagaaatcattcaatgtacatttata
gaagggttaagtcagaaagaaacaggagaacgtatcggtttaagtcaaatgcatgtgtct
cgattgcaacgtaatgcaattaaaaagctgcagcaagcggcaaaaaagtga
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