Staphylococcus piscifermentans: SAMEA4384060_0973
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Entry
SAMEA4384060_0973 CDS
T06938
Symbol
yhgF
Name
(GenBank) RNA binding protein
KO
K06959
protein Tex
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SAMEA4384060_0973 (yhgF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
SNV01194
LinkDB
All DBs
Position
1:1045753..1047906
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AA seq
717 aa
AA seq
DB search
MDSQLIQTIEQQYDFSKKQITAVLSLLEENNTVPFIARYRKERTGGLDEVEIKKIADEYH
YMEQLQKRKEEVIHNIEQQGMLTDELKSDILKQTKLQRVEDLYRPYKQKKKTRATEAKRK
GLEPLAKWLKQEKIDALPEDYAAQFLNEEVETVQEALVGAQDIIAEWISDNPQYRNKILS
ETLKRGLITTQKKKKAEDEKHIFEMYYDFSEPIKKVANHRILAMNRGEKEKVLTIKIEID
TDRLEKQIEQQEVKGHHAGTGYIKEAIKDSLKRLIMPSIEREIRSDLTEQAETHAIEVFS
VNLKHLLLQPPLKGKQILGVDPAFRTGCKLAVINPFGSFVAKGVMYPHSPVSKTKEAEQI
LLQFINDYDVSLIAIGNGTASRETEQFIADLIQKHKLDVQFIIVNEAGASVYSASEVARN
EFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKALENALNFVVETAV
NQVGVDVNTASQSLLQHVAGLSPQIAQNIINYREENGALTHHKQISKVKRLGPKTFEQSI
GFLRIVNGKEPLDNTAIHPESYQVAYQLLEEEGLTEADIGSKALKDKLSGIDIQATAEKL
NVGVPTLEDIVAALVAPNRDPRDEYETPILKSNVLSIEDLTKGMKLSGTVRNVVDFGAFV
DIGVKQDGLVHVSQLSKRFVKNPMDIVNVGDIVDVWVLSADAEKHKVSLTMINPNEQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttggattcacaattaattcagacgatagaacaacaatacgatttttcaaagaaacaaatt
acagccgtactttctttattagaagaaaataacacagtgccttttattgcacgttaccgt
aaagaacgcactggcggattagacgaagtcgaaattaaaaagattgctgatgagtatcac
tacatggaacagttgcaaaaaagaaaagaagaagtgatacataatattgaacaacaaggc
atgctgacagatgaactgaaatccgatattttgaaacaaacaaaattacaacgggtggaa
gatttatatagaccttataaacagaaaaagaaaacacgtgcaacggaagctaaaagaaaa
ggacttgaaccgttagctaagtggttgaaacaagaaaaaattgatgcactacctgaagac
tatgctgcacaatttcttaatgaagaagttgaaacagtccaagaagcattagtaggtgcg
caagatattattgctgagtggatctcagacaacccgcaatatcgcaataaaatattgagt
gagacattaaaaaggggacttattacgacacagaaaaagaaaaaagcagaagatgaaaaa
catatctttgaaatgtattatgatttttcagaaccaatcaaaaaggttgcgaaccataga
attttagctatgaaccgtggtgaaaaagaaaaagttttaactattaaaattgaaatagac
accgatagacttgaaaaacaaattgaacaacaagaagtgaaaggacatcatgctggtaca
ggttatatcaaagaagcaataaaagatagcttaaaacgtctaattatgccatctattgaa
agagaaatacgttcagacttaactgagcaagcagaaacacatgcgattgaagttttcagc
gtaaatttaaaacatctattactccaacccccattaaaaggaaaacaaattctaggagta
gaccctgcctttcgaacaggttgtaaacttgcggtcataaatccttttggttcatttgtt
gctaaaggtgtgatgtatcctcattcgccagtatcaaaaacaaaagaagcagaacagatt
ttactgcaatttatcaatgattatgatgtaagcttgattgcaattggcaatggtacggca
agtcgtgaaacagaacaatttattgccgatttaattcaaaaacataaactggatgtccaa
ttcattattgtgaatgaagcaggtgcatcagtatactctgcgtcagaagtagcgcgtaat
gaattccctgattttcaagttgaagaaagaagtgctgtctctattggtcgtcgagttcaa
gatccgttaagtgaactggtgaaaattgatcctaaatcaattggcgttggacaatatcaa
catgatgttaatcagaaggctcttgaaaacgctttgaatttcgtggttgagacagctgta
aaccaagtgggcgttgatgtgaatactgcttctcaatctcttttacagcatgtcgcaggt
ctatctcctcaaatcgctcaaaatattataaactatcgagaagaaaacggagctttaacg
catcataaacaaatcagcaaagttaaaagactaggtccgaagacatttgagcaaagtata
ggatttcttagaattgtaaatggtaaggaaccgcttgataacacagcaattcatccagaa
agctatcaagttgcatatcagttgttggaagaagaaggactgacagaggcggatattggc
agtaaagcattgaaagataaactgagtggtatagatatacaagctactgcggaaaaattg
aatgttggagtgccgactttagaagatattgttgctgctctagtagcacctaacagagat
ccgcgtgatgaatacgaaacaccgattcttaaatcgaatgttctttcaattgaagattta
acaaaaggtatgaaattaagcggtacggtaagaaacgttgttgattttggtgctttcgta
gacattggcgtaaaacaagatggtcttgttcatgtttcgcaactatctaagcgttttgtt
aaaaatccgatggacattgtgaatgtaggagatattgtcgatgtttgggtattgagtgca
gatgcagaaaaacataaagtttcattgacaatgataaatccaaatgaacaataa
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