Staphylococcus piscifermentans: SAMEA4384060_1042
Help
Entry
SAMEA4384060_1042 CDS
T06938
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic03420
Nucleotide excision repair
spic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4384060_1042 (pcrA)
03430 Mismatch repair
SAMEA4384060_1042 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_1042 (pcrA)
Enzymes [BR:
spic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4384060_1042 (pcrA)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4384060_1042 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4384060_1042 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SNV01729
LinkDB
All DBs
Position
1:1120340..1122535
Genome browser
AA seq
731 aa
AA seq
DB search
MNALLNNMNTEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKGVSPYNVLAITF
TNKAAREMKERVEKLVGEEAQAIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKRENIDPKRYEPRMFIGQISNLKNELKTPEDAVAEATDFMSDMVARVYEGYQRQL
SRNAALDFDDLIMTTITLFKRVPDVLEYYQNKFQYIHVDEYQDTNRAQYTLVQLLARKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPNAKTIFLEQNYRSTKVILNAANEVIKNNT
ERKPKGLWTANNEGKKINYYEAVTEKDEAQYVVKEIMRQQRENNKSFNDMAILYRTNAQS
RVLEETFMKANIPYTMVGGHKFYDRKEIKDLLSYLRLVANSNDDISLQRVINVPKRGIGP
TSVEKIQNYAQQNDISMFDALAEADFIGLSKKVVKEALGFYNLISNLIKEQEFLEITEIV
EEILEKSGYKEMLERDQSLESRSRLENIEEFMSVPMDYEKNTPLEEQSLINFLTDLSLVA
DIDEADIENGVTLMTMHSAKGLEFPIVFIMGMEESIFPHIRSIKSDDEHEMEEERRICYV
AITRAEEELYLTHATSRTLFGRIQSNAASRFLREIPEDLLDKGKKKESRIGSSFGNKKPA
KRGPSRRVSRNAAVASNDWHVGDKVMHKAWGEGMVSNVNEKNGSVELDIIFKSQGPKRLL
ANFAPIEKKED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgttattaaacaatatgaatacggaacagagcgaagcggtgcgcacaacagaa
ggcccgcttttaatcatggccggagcaggttcaggaaaaacgagagtcttaacgcatcga
attgcttatttgttagatgaaaagggagtttctccttataatgtgttagctattactttt
acaaataaagccgcacgtgaaatgaaagaacgtgtagagaaacttgtaggcgaagaggca
caagcaatctggatgtcgactttccactccatgtgcgtacgaatcttacgtagagatgca
gaccgcattgggattgaacgcaactttacgatcattgatccaactgaccagaaatcagtg
ataaaagatgtattaaaacgcgaaaatatcgatccgaaacgttatgaaccaagaatgttc
atcggtcaaatcagtaatttgaaaaatgaattgaaaacacctgaagatgcagtagctgaa
gcgacagatttcatgtctgacatggtcgcacgtgtttatgaaggttatcaacgtcaattg
tcccgaaatgcagcattagattttgacgacttgattatgactacaatcactttattcaaa
cgggttccagatgtcttagaatattatcaaaataaattccaatacatccatgttgatgaa
taccaagataccaaccgtgcgcaatatactttagtgcaattactcgctcgtaaatttaaa
aacttatgcgtcgtaggggattcagaccaatctatttatggttggcgtggtgctgatatc
caaaacattttatcatttgaggaagattatccgaatgctaaaacgattttcttggaacag
aattatcgttcaacgaaagtgattttaaatgctgcaaatgaagtgataaaaaataataca
gaacgtaaacctaaaggcttatggacagccaataatgaaggcaagaaaatcaattattat
gaagcggtaactgaaaaagatgaagcacaatacgtggtaaaagaaatcatgcgtcagcaa
cgcgaaaataataaaagcttcaatgatatggccattttatatcgtacgaatgcccaatct
cgtgtgcttgaagaaacatttatgaaagctaatatcccatacacaatggtcggtggccat
aagttctatgaccgtaaagaaatcaaagacttgttgagttatttacgtttagttgccaac
agtaacgacgacatcagcttacaacgtgtgattaatgtaccgaaacgcggtatcggtcca
acttctgtagaaaaaatccaaaattacgcacaacaaaatgatatcagtatgtttgatgcc
ttggcagaagcagactttatcggactttctaaaaaagtagttaaagaagctttaggattt
tacaatttaatctctaacttgattaaagaacaagaattcctagaaatcactgaaattgtg
gaggaaatcttggaaaaatctggttataaagaaatgttggaacgtgatcaatcactcgaa
tcacgcagccgtttggaaaatattgaagagttcatgtctgtaccaatggattatgagaaa
aataccccgttagaagagcaatcattaatcaacttcttaacagatttatcactagttgct
gatattgatgaagcagatattgaaaatggtgtaactttaatgacaatgcactcggcaaaa
ggtttggaattcccaatcgtctttattatgggtatggaagaatctatcttcccgcatata
cgctccatcaaaagcgatgatgaacatgaaatggaagaagagcgtcgtatttgttatgta
gctattactcgtgctgaagaagagttatatctgactcatgcgacttctagaactttattc
ggacgtatccaatctaatgcggcttctagatttttaagagaaattccagaagatttgctg
gataagggtaaaaagaaagaaagcagaatcggtagttccttcggtaataaaaaacctgct
aaacgcggacctagccgacgtgtttctagaaacgcagctgttgcttctaacgattggcat
gttggagataaagtgatgcataaagcatggggcgaaggtatggtcagcaatgtgaatgag
aaaaatggttctgtagaattagatattattttcaaatcacaaggacctaaacgattacta
gcgaattttgctccgattgagaagaaggaggattaa
DBGET
integrated database retrieval system
