Staphylococcus piscifermentans: SAMEA4384060_1138
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Entry
SAMEA4384060_1138 CDS
T06938
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spic03019
]
SAMEA4384060_1138 (yhaM)
Messenger RNA biogenesis [BR:
spic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA4384060_1138 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
SNV02619
LinkDB
All DBs
Position
1:1197019..1197960
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AA seq
313 aa
AA seq
DB search
MRNVEKLQPGDSVDHFFLIHRATQGVTAQGKDYMTLFLQDKSGEIEAKLWTVSKQDMEVL
KPETIIRAKGDVINYRGRKQMKVNQFKLAEPADNLAAKDFIDGAPLTPDEIKEQIDYFLL
DIENSKLQRITRHLLKKYNNAFFVYPAASSIHHNFASGLSYHVLTMLKIAKSLCDIYPLL
NRSLLYSGVILHDIGKVKELSGPVATSYTVEGNLLGHISLASEEVSQTAEELGIEGEEVM
LLKHMILSHHGKLEYGSPKLPMLKEAEILCYIDNIDARMNMFDKAFKKTSKGQFTEKIFA
MEHRQFYNPENLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatgttgaaaagcttcaacccggcgactcagtcgatcatttcttcttgattcac
cgagcaacacaaggcgttacagcacaaggtaaagactacatgacattgtttttgcaagat
aaaagcggtgaaatagaagcgaaactttggacagtgtccaagcaagatatggaagtgctg
aaacctgaaactatcattcgtgcgaaaggtgatgtaattaattaccgaggtcgcaaacaa
atgaaagtcaatcagtttaaacttgctgaacctgcagataatttagcagctaaagatttt
atagatggtgcacctttaacaccagatgaaatcaaagagcagattgattatttcttattg
gatattgaaaatagcaaattacaaagaattacaagacatttattgaagaaatataacaac
gcgttctttgtatatccagcagcaagttcaatccatcataacttcgcgagcggcttgagc
tatcacgtgcttactatgttgaaaatcgctaaaagtttatgtgatatctacccattatta
aaccgcagcttactgtatagcggtgtcatcttgcatgatattgggaaagttaaagaactg
agcggaccagtggcaacttcctacacagtagaaggtaatttgcttggacacatatcgtta
gccagcgaagaagtgtcacaaactgctgaagagttaggaattgaaggggaagaagtgatg
ttgttgaaacatatgattctttctcatcacggcaagttggaatacggttcgcctaaatta
ccgatgttgaaagaagcggagattctatgctatatcgataatatcgatgctcgaatgaat
atgtttgataaagcctttaaaaagacaagtaaaggccaatttactgaaaaaatattcgca
atggaacatcgacaattctataatccagaaaatcttgattag
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