Staphylococcus piscifermentans: SAMEA4384060_1422
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Entry
SAMEA4384060_1422 CDS
T06938
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4384060_1422 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_1422 (xseA)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA4384060_1422 (xseA)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA4384060_1422 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
dCache_1
Glyco_tran_WecG
Gal80p_C-like
COMPASS-Shg1
Motif
Other DBs
NCBI-ProteinID:
SNV03988
LinkDB
All DBs
Position
1:1470032..1471375
Genome browser
AA seq
447 aa
AA seq
DB search
MSDYLSVTALTKYIKYKFDQDPHLQSVLLKGELSNFKKHSSGHLYFNLKDKNSVVNAMMF
KAQANKLDFEPKEGDEVLIEARVSVYERRGNYQIYVSKMHLDGIGNLYQKLEALKKELKK
QGLFDEIHKKPIPKFPQKIAVLTASTGAAIRDIHSTINSRYPLVEQIQISTLVQGEQAKN
DIIEKIKYADTLGADVIIVGRGGGSIEDLWNFNEEEVVRAIFKAETPIISAVGHETDFTL
SDFVADVRAATPTQAAVMATPDQVELSQYIKQMELHLSRQIFQIINNKKKHLEHVSSYYK
FKQPSLLYDQQIQRRDDLERQMNLSIKAKLERSQQQLQLLANRLNLRDLKQQTLQGMQTR
LQLHESLNKSITNVLKNSKKQLSQRVETLNNLSPSNTMLRGYTIVNKEDQVVTSTQSLKT
NDEINLQMKDGTVDAIVKKVRCNDNEQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatttaagtgtaacagcgctaactaaatatattaaatataaatttgaccaa
gatcctcatttgcagtctgtactattaaaaggggaactttctaatttcaaaaagcatagc
agcgggcacttgtatttcaatttgaaagataaaaacagtgtagtcaatgcgatgatgttt
aaagcgcaagcaaacaagttggatttcgaacctaaagaaggcgatgaagtcctaattgaa
gcacgtgtatctgtttacgaacgacgtggcaattatcaaatttacgtatctaaaatgcac
ttagatggtataggtaatctatatcaaaaattagaagctctaaaaaaagaactgaaaaaa
caaggcttatttgatgaaatacacaagaaacccataccgaaatttccccaaaagattgct
gtgcttactgctagcactggtgcagcaatcagggacattcactcgactatcaatagtcgc
tatcctctagtagagcaaatacaaatcagtacacttgttcaaggagaacaagctaaaaat
gatattattgaaaaaatcaaatatgcagacacattaggagcagatgtcattattgtcgga
cgtggcgggggttctatagaagatttatggaatttcaacgaagaagaagttgttagagct
attttcaaagctgaaacacctatcatctcagctgtaggacatgaaacagactttacacta
agtgattttgtagctgatgtgagagcagctacaccgacacaagcagccgttatggcgact
cctgatcaagtcgaattaagtcagtacattaaacaaatggaacttcatctttcccgacaa
atttttcaaatcattaataataagaaaaagcacttagaacatgtttcctcatactataaa
ttcaaacagccatcgttattatatgatcagcaaatacaaagaagagacgacttagagcgt
caaatgaatctttcgataaaggctaaacttgaacgttcacaacaacaacttcaattacta
gccaatcgtttgaatttacgagacttgaaacaacaaactttgcaaggcatgcaaacaaga
cttcaattacatgaatcacttaataaatctattacaaatgtgttgaaaaattctaaaaaa
caattgagccaaagagttgaaacattaaataacttaagtccttcaaatacaatgttacga
ggttatacaattgtaaataaagaagaccaagttgttacaagcactcaatccttgaaaact
aatgacgaaatcaatttacagatgaaagatggtactgtagatgcaattgttaagaaagta
aggtgtaatgataatgagcaataa
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