Staphylococcus piscifermentans: SAMEA4384060_1423
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Entry
SAMEA4384060_1423 CDS
T06938
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4384060_1423 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_1423 (xseB)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA4384060_1423 (xseB)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA4384060_1423 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Caskin-tail
Retrotrans_gag
DUF7782
DUF2120
NEMO
IF-2B
Motif
Other DBs
NCBI-ProteinID:
SNV03994
LinkDB
All DBs
Position
1:1471365..1471583
Genome browser
AA seq
72 aa
AA seq
DB search
MSNNQTFEEMMEELETIVKKLDNEAVSLEDALELYQKGMKLSASCDETLKDAEKKVNQLM
KNDDEEVEQTDE
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataatcagacttttgaagaaatgatggaagaattagaaacgattgtaaaaaag
ttagataacgaagctgtctctttagaagatgcattagagttatatcaaaaaggtatgaag
ttatctgcctcatgtgatgaaactttaaaagatgcagagaaaaaagtaaatcaattgatg
aaaaatgatgacgaagaagttgagcaaactgatgaataa
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