Staphylococcus piscifermentans: SAMEA4384060_1429
Help
Entry
SAMEA4384060_1429 CDS
T06938
Symbol
bfmBC
Name
(GenBank) putative E3 component of branched-chain alpha-keto acid dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00010
Glycolysis / Gluconeogenesis
spic00020
Citrate cycle (TCA cycle)
spic00260
Glycine, serine and threonine metabolism
spic00280
Valine, leucine and isoleucine degradation
spic00310
Lysine degradation
spic00380
Tryptophan metabolism
spic00620
Pyruvate metabolism
spic00630
Glyoxylate and dicarboxylate metabolism
spic00640
Propanoate metabolism
spic00670
One carbon pool by folate
spic00785
Lipoic acid metabolism
spic01100
Metabolic pathways
spic01110
Biosynthesis of secondary metabolites
spic01120
Microbial metabolism in diverse environments
spic01200
Carbon metabolism
spic01210
2-Oxocarboxylic acid metabolism
spic01240
Biosynthesis of cofactors
Module
spic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spic_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
spic_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SAMEA4384060_1429 (bfmBC)
00020 Citrate cycle (TCA cycle)
SAMEA4384060_1429 (bfmBC)
00620 Pyruvate metabolism
SAMEA4384060_1429 (bfmBC)
00630 Glyoxylate and dicarboxylate metabolism
SAMEA4384060_1429 (bfmBC)
00640 Propanoate metabolism
SAMEA4384060_1429 (bfmBC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA4384060_1429 (bfmBC)
00280 Valine, leucine and isoleucine degradation
SAMEA4384060_1429 (bfmBC)
00310 Lysine degradation
SAMEA4384060_1429 (bfmBC)
00380 Tryptophan metabolism
SAMEA4384060_1429 (bfmBC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAMEA4384060_1429 (bfmBC)
00670 One carbon pool by folate
SAMEA4384060_1429 (bfmBC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spic04147
]
SAMEA4384060_1429 (bfmBC)
Enzymes [BR:
spic01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SAMEA4384060_1429 (bfmBC)
Exosome [BR:
spic04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SAMEA4384060_1429 (bfmBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
AlaDh_PNT_C
HI0933_like
GIDA
DAO
FAD_binding_2
3HCDH_N
Trp_halogenase
FAD_binding_3
Lycopene_cycl
Thi4
Lys_Orn_oxgnase
TrkA_N
NAD_binding_7
Zn_ribbon_11
2-Hacid_dh_C
ThiJ_like
Motif
Other DBs
NCBI-ProteinID:
SNV04024
LinkDB
All DBs
Position
1:1477083..1478507
Genome browser
AA seq
474 aa
AA seq
DB search
MAEEQYDLVILGGGTAGYVAGIRASQLGKKVAIVENQLLGGTCLHKGCIPTKTLLKSAEV
LHTVKTASLYGIDTEHFSINYKQILDRKNEIIQQMYTGIEHLMKHNHIDIYNGTGRILGS
SIFSPRPGTISVEYEDGASELLPNDYVLIATGSKPAELPFLKFNHQTIISSTDLLNMKQL
PDSIVIVGGGVIGMEFASLLNDFGTDVTVIEAGERILPSENKNIASNLKKHFTDRGIKIY
ENVQLSQESFTLKDEAIEINEADLKLTADKILLAIGRTPNTSDIGLNNTKIATDAKGFIE
VNENQQTAEQHIYAAGDCIGKLQLAHAGSKEGTTAVEAMFEDNTIPVNYNTIPRCIYTYP
EIASIGMTLEEAKDADYTKARSFKVPFKAVGKAVIEDATQQDGFCELVVDQDTETVLGLS
MIGPHVTELINEVALLQFMNGSTLELGLTTHAHPSISEVLMEAGLKAAKRSVHA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacaatatgacctagtgatattaggtggcggcactgcgggatatgtagca
ggcattcgtgcatctcaattagggaagaaagtcgctatagtagaaaatcaattattaggc
ggaacttgtttgcataaaggatgtattcctacaaagacattattaaagtcagctgaggta
ttacatactgtgaaaacagcttcattatatggtattgatacagagcatttttcaattaat
tataaacaaattttggatagaaaaaatgaaattatccagcagatgtatacaggaattgag
cacttgatgaaacataaccacatagatatttataatggaacaggtagaatcttaggttct
tctatcttttcaccaagaccaggcactatatcggttgaatatgaagatggagcatccgaa
ctcttacctaatgattatgtgcttattgctactggttctaaaccagctgaactgccattc
ttgaaattcaatcatcaaacaattatttcaagtactgatttgctcaatatgaagcaattg
cctgactctatagtgatagtaggcggcggtgttatcggaatggaattcgcttcattactt
aatgatttcggcactgatgttactgtgatagaagccggcgagcgtatattgcctagtgaa
aataaaaatattgccagtaacttaaagaaacattttactgatcgcggcattaaaatttat
gaaaatgttcaactttcccaagaaagttttactttaaaagatgaagcaatagaaattaac
gaagctgatttaaaactaactgcagataaaatattgctagcaatcggcagaacgccgaat
acatctgatataggattgaacaataccaagattgccacagatgctaaaggctttattgaa
gttaatgaaaatcaacaaacagcagaacaacatatctatgcagcaggagattgtattggt
aaacttcagctggcacatgcaggttctaaagaagggacaactgctgtagaggccatgttc
gaagataacacaatccctgttaattataatactattccaagatgtatctacacttatcct
gaaattgcttctatcggtatgactttagaggaagctaaggacgcagactatacaaaagcc
agaagttttaaagtgccatttaaagctgtaggtaaagctgtcatcgaagacgcaacacaa
caagacggattctgtgaattagttgtagatcaagacacagaaactgtattaggcttaagc
atgatcggcccgcatgttacagaattgattaatgaagttgctttattgcaatttatgaat
ggatcaacactagaattaggattgacgactcatgcacatccttcaatttctgaagtgtta
atggaagcaggacttaaagcagcaaaacgctcagtgcatgcttaa
DBGET
integrated database retrieval system
