Staphylococcus piscifermentans: SAMEA4384060_1439
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Entry
SAMEA4384060_1439 CDS
T06938
Symbol
rnz
Name
(GenBank) putative ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spic03016
]
SAMEA4384060_1439 (rnz)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SAMEA4384060_1439 (rnz)
Transfer RNA biogenesis [BR:
spic03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SAMEA4384060_1439 (rnz)
Prokaryotic type
SAMEA4384060_1439 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
PDEase_II
RNA_binding
Motif
Other DBs
NCBI-ProteinID:
SNV04080
LinkDB
All DBs
Position
1:1489006..1489926
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AA seq
306 aa
AA seq
DB search
MEITFLGTGAALPTKERNTQAIALNLEPYSNSIWLFDAGEGTQHQILHHSIKLGKINHIF
ITHMHGDHIYGLPGILTSRSFQGGENKPLTIVGPRGIKEYIEITLQASLSRLNYPITFIE
IDEQLHYQHEGITVTAYHLNHGVPSFGYRIEAPTTPGKINVAALREIGMEPGPKYQEVKD
SETFIFNDKIYQSSEFKGEAKVGPKIAIFGDTMPCENELKIAHGVDVLVHESTYIDGDRT
LADNHHHSHIADVLSLLEESEAKQALLNHISNRYNLNDIDKLYAELQNQYPDLKFKFVRD
FDTFTI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaaattacatttctcggtacaggcgccgctttgccgaccaaagaacgcaatacacaa
gctatagcgctcaacttggaaccatattctaattctatctggctctttgatgcaggggaa
gggacacaacatcaaattctgcatcattctattaaactcggaaaaattaatcatatcttt
ataacgcatatgcatggcgatcatatctatggattgccaggcatattgaccagtcgttct
ttccaaggcggcgaaaataaacctttaacaatagtaggtcctagaggtatcaaagaatac
attgagatcacactgcaagcttcactttcacgtttgaattatccaattacctttattgaa
attgatgaacagttgcattaccaacatgaaggcattacagttactgcgtaccatctgaat
catggtgtaccttcgttcggttatcgtattgaagcaccgactacaccaggaaaaataaat
gttgctgccttacgtgaaattggaatggaacctggaccaaaatatcaagaagtaaaagat
tctgagacctttattttcaatgataaaatctatcaatcttcagaatttaaaggggaagca
aaagttggtccgaaaatcgcaattttcggagatacaatgccgtgtgaaaatgaacttaaa
atcgcacacggagtcgatgttcttgtccatgaatctacatatatagatggcgatagaaca
ttagcagataaccatcatcatagtcatattgctgacgttttatctttgctagaagaatca
gaagcgaaacaagcattattaaatcatatcagcaatcgttacaatctaaatgatatagat
aagctctatgctgagttacagaatcaatacccagatttaaaatttaaatttgtcagagat
tttgatacttttacaatctaa
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