Staphylococcus piscifermentans: SAMEA4384060_1449
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Entry
SAMEA4384060_1449 CDS
T06938
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spic03009
]
SAMEA4384060_1449 (rluB)
Enzymes [BR:
spic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SAMEA4384060_1449 (rluB)
Ribosome biogenesis [BR:
spic03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA4384060_1449 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
SNV04137
LinkDB
All DBs
Position
1:1496759..1497496
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AA seq
245 aa
AA seq
DB search
MSKELERLQKRIANSGYTSRRKAETLITEGKVKVNGETVTELGTKVKASDNVEVEGVKLE
QEDKLYILFYKPAQVITSVSDDRGRTVVTDYFDDLETRIYPVGRLDYDTSGLLLLTNDGE
FTNLMTHPRYKIKKKYVAKLKGYLMRDEVKALEKGIQLEDGKTHPAEIKIKNQNQEKNTT
VVEITISEGRNRQVRRMFEHFGHEVTKLSRIELGGFLTLKGLNAGEGRVMTPHEVKKLRN
LAENG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaattagaaagattacaaaagagaattgcaaacagcggctatacttcacgc
agaaaagcggaaacattaatcactgaagggaaagttaaagtaaacggtgaaacagtaact
gaattaggcacaaaagttaaagcttctgataatgtcgaagtagaaggtgttaagttagaa
caagaagataaactttatattcttttttacaaaccggcacaagtcattaccagcgtttca
gacgatcgcggcagaacagttgtaacggattatttcgatgacttggaaacgcgaatttat
cctgtgggcagattagattatgatacttcagggttattgctgttaactaacgatggagaa
ttcactaatctaatgacacatccgagatataaaatcaagaagaagtacgttgctaaatta
aaaggatacttaatgagagatgaagtcaaagcgctggaaaaaggtattcaattagaagat
ggtaaaacgcatccagctgaaatcaaaatcaaaaatcaaaaccaagaaaaaaatacaacg
gtagtagaaattacaatctcagaaggcagaaaccgtcaagtacgccgtatgtttgaacat
tttgggcacgaagttactaaactttcacgtattgagttaggcggatttttaacacttaaa
ggtttaaatgctggtgaagggcgtgtaatgacgccgcatgaagttaaaaagctcagaaac
ttggccgagaacggttaa
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