Staphylococcus piscifermentans: SAMEA4384060_1590
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Entry
SAMEA4384060_1590 CDS
T06938
Symbol
sbcC
Name
(GenBank) putative DNA repair ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_1590 (sbcC)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4384060_1590 (sbcC)
Archaeal homologous recombinant proteins
SAMEA4384060_1590 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
NTS
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SNV04879
LinkDB
All DBs
Position
1:complement(1643521..1646556)
Genome browser
AA seq
1011 aa
AA seq
DB search
MKPLKLHLQNVGPFMDETIDFTQLHNNELFLISGKTGSGKSMLFDAIVFALYGKASTASR
KEGALRSHFADGKSPMEVELIFQLKDKQFKVIRQGAFVKEGNKNQTHPNLAVYELENDRY
ELRESKVNAGNNYIQELLGVNIEQFRQLFILPQGEFKKFLFSKSSSKQEILRTLFNTNRF
EALQQRLVNQNKEEKKKIEMRHQQIEQLWNKVEDFDNEKLQEYKTLPSIQTEKLLNSIPE
FERIGKEIYQQLENEKIQQDELKQKAEKSFREAEELNQKMAEQSDLTAQLETLEKQASEI
KILEAQLKKIREVRPLHQIIENISGQTAKLNELNDRFEKIEAHIQQYQSQLQTVTTQQEK
LAETQNDIELQQQFMNDTQYFYQNHQQYKNAYRNQAQVQEEYEQSQKDLKQNEQLLKRIE
ADYQNEQPDYERLNQLTQQIFDLKQQIKDTEATIEKEEAQVQRLTRLKVLEQELTDNTQK
LNEFQAKISQFNTNQLELDNQETMIKKLQSMLQPGDQCPICGNTIQSLSDHLDFEELRAQ
REMLNTLHENKEEIRTAHSKLEAEYNMLKSEVEKFEREELPENNTQILQDLKKQYEKAET
DKQHQDKRNKEIEKANAQVQQIKDDIQSLQLTLTQKKADIEKIDGLIEDFEKGTSFRNVM
DFMNDFAQKQDMVKDYQKQTEALKQQEIEVKQQIAIEQTKHTSVQDNRKETDKAIAHLKQ
QSQIEMENIGIQSTDEVQEILDLMPKKEEIEERIKIYHDKENNLSHKLAELKAVIGNQEH
PDLEQLSNNLETQKRVLEEKSKRLNEHEFKLQLNASHFTEIHEHIDVLAKELAEQQEIFD
LAEILSGKNIQKLTLENYVLVYYLEMILEYANKRFMRMTNNRYILKRSEEVTQGYSGLEI
VVFDSHSNKTRHISTLSGGESFQASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQE
TLETALDTLLNIKSTGRMVGIISHVSELKQRIPTILEVKTDAYQSTTQFKF
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccttaaagcttcatttacaaaatgtcggtcctttcatggatgaaactatagat
tttactcaactgcataataatgagctttttttaatcagtggcaaaacagggtcaggtaaa
tctatgctgtttgatgccattgtatttgcgttatatggaaaagcttctacagcatccaga
aaagaaggcgcattgagaagtcactttgctgatggaaagtctccgatggaagttgaactt
atttttcaattaaaagataagcaatttaaggtaatcagacaaggtgcgttcgttaaagaa
ggcaacaaaaatcaaacacatcccaatttagctgtgtatgaattagaaaatgatcgttat
gaactcagagaaagcaaagtgaacgctgggaataattatattcaagaattgttaggtgta
aatatagaacaattcagacagttatttatcttaccgcaaggagaatttaagaagtttctg
ttttctaagagttcctccaagcaagaaatacttagaactttattcaatacgaatcgtttt
gaagcattacaacaacgattagtaaaccaaaataaagaagaaaagaaaaagattgaaatg
agacaccaacagattgagcaattatggaataaagtagaagatttcgataatgaaaaattg
caagaatataaaacacttccaagtatacaaacagaaaagttattaaacagtattcctgaa
tttgaacgaattggaaaagaaatttaccaacaattggaaaatgaaaaaatccaacaagat
gaactcaaacaaaaagcagagaaatcctttagagaagccgaagaattgaatcagaaaatg
gcagaacaaagcgacttaacagctcagctagaaacacttgaaaagcaagcttctgaaatt
aaaatacttgaagctcaactgaagaaaattcgagaagtacgcccgcttcaccaaatcata
gaaaatatttctggacaaactgcaaaattgaatgagttaaatgatagatttgagaaaatt
gaagcccatattcaacaatatcagtctcagttgcaaacagttacaacacaacaagaaaaa
ttagcggaaactcaaaatgatatagaattacaacagcagtttatgaatgatacgcaatac
ttttatcaaaatcatcaacaatacaaaaacgcatatcgtaatcaagcacaagtacaagaa
gaatatgagcaatcacagaaagatttaaaacaaaatgagcagttattaaagagaatagaa
gcggattatcagaatgaacagcccgattatgaacgactgaatcaactgacacaacaaata
ttcgatttaaaacaacaaattaaagatacagaagcgacgatcgaaaaagaagaagcacaa
gtgcaacgtttaacaagattaaaagtattagaacaagaattaacagataatactcaaaaa
ttgaacgagtttcaggcaaaaatttcacaatttaacaccaatcaattagagttagataat
caagaaacaatgatcaaaaagctgcaatccatgttgcaacctggagaccaatgtccgata
tgtggcaatacgattcaatctctttcagatcacttggatttcgaggagctaagagcgcaa
agggaaatgttgaatactttgcatgaaaataaagaggaaattcgaacggctcattcaaaa
ttagaagctgaatataatatgcttaaaagtgaagttgaaaaatttgagcgagaagagttg
ccagaaaacaatacacaaatacttcaagacttgaaaaaacaatatgaaaaagcggaaaca
gataagcagcatcaagataaacgcaataaagagattgagaaggccaacgcacaagttcag
caaattaaagatgatatccaaagtttgcaactcacgctcactcaaaagaaagctgatatt
gaaaaaattgatggattaattgaggattttgaaaagggtacttctttccgtaatgtaatg
gattttatgaatgattttgcacagaaacaagatatggtaaaagattatcaaaaacaaaca
gaagcattaaaacaacaagaaatagaagtgaagcaacaaattgcaattgaacaaacaaag
catacttcagtgcaggataaccgtaaagaaactgataaagcaatcgcacacttaaaacag
caatctcaaattgaaatggaaaatatcggcatacaaagtactgatgaagtgcaagaaatt
ttagatttaatgccgaaaaaagaggaaattgaagagcggattaaaatttatcatgataag
gaaaataatttatctcataaacttgctgaattaaaagcggttatcggaaatcaagagcat
cctgatttggagcagttgtcgaacaatctggaaacgcagaaaagagtgcttgaggagaag
tcgaagcggttaaatgagcatgaatttaagttgcaattaaatgcgagccatttcacagaa
attcatgaacatatagatgttttagcaaaagagttagcagaacaacaagaaatctttgat
ttggctgaaattctatcaggaaaaaatattcaaaagctgacgttagaaaattacgtttta
gtttactatttagaaatgatactggagtacgctaataaacgttttatgagaatgaccaat
aataggtatatcttaaagcgcagtgaagaagtaacgcaaggttatagcggtctagaaatt
gtagtcttcgattcacattcaaataaaacacgtcatatctctacgctgtcaggtggagaa
tcgttccaagcttctctagcattagcgcttggtttaagcgaggttgtacagcaggaatct
ggaggtattactttagaatcgatgtttatagacgaaggtttcggcacgcttgatcaagaa
acgttagaaacagccttagacactctattaaatattaaatcgacaggaagaatggtaggt
attatttcacatgtaagcgagttgaaacaacgtatacctacaattctagaagtaaaaaca
gacgcttaccaaagtacgacacaatttaagttttaa
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