Staphylococcus piscifermentans: SAMEA4384060_1591
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Entry
SAMEA4384060_1591 CDS
T06938
Symbol
sbcD
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_1591 (sbcD)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4384060_1591 (sbcD)
Archaeal homologous recombinant proteins
SAMEA4384060_1591 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
DNA_pol_E_B
Metallophos_3
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-ProteinID:
SNV04885
LinkDB
All DBs
Position
1:complement(1646553..1647680)
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AA seq
375 aa
AA seq
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MKVIHTADWHLGKILNGQSFLEDQKYILEQFIAAMKEEQPDLIVIAGDLYDTSYPSKEAI
QLLETTIGELNLKLQIPIIIISGNHDGKERLNYGASWFEHSKLYIRTKLDTMHQPISFEN
IDFYTLPFATLSEIQHYFPEEKLKSYDEAVECCLKRISSELDKDKQNVLIAHMTVAGGIR
SESERPLTIGTVEQVPEKYMEHFDTVMLGHLHHPFSIQSNYVFYSGSLLQYSFSEANQPK
GYRRVLLEAPHEVESTFIAMQPLRELEVIEATYEDVIQDRIAVKNRDNYFHFKLSEMSHI
TDPIMNIKQLYKNVLALTNHSQTFEHQFTDREIKKLPDQTIIGTFYEEMTHKELSELQQK
KVTQLLNEIMRGDQT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtcatacatacagctgactggcatctaggaaaaattttaaatggccagtcattc
ttagaagaccaaaaatatatcttagaacaatttattgcggcaatgaaagaagaacagccg
gatttaatcgttattgcgggagacttatacgatacgagttatccgagcaaagaggcgatt
caattacttgaaacaacgattggtgaattaaatttaaagttgcaaattccaattattata
atcagcggcaatcatgacggtaaagaacgtttgaattatggcgcttcttggtttgagcat
tcaaaactctatatacgcaccaaactagataccatgcatcaacctatttcatttgaaaat
atagacttctatacattgccatttgcgacgttgagtgaaatacagcactattttccagaa
gaaaagttaaaatcatatgatgaagcggtagaatgttgtttaaagcgtatcagcagtgag
ttagataaagataagcaaaatgtgttgattgctcatatgacagtagctggcggaatcaga
agtgaatcagaacgcccattaacaattggtacagtcgaacaagtgccagaaaaatatatg
gaacatttcgatactgtcatgctagggcatttacatcatcctttcagtattcaatcaaat
tacgtcttttatagtggttcacttttgcagtattctttttcagaagctaatcagccgaaa
ggttatcgtcgtgtattgttagaggcaccacatgaagtggaaagcacctttatagcaatg
cagccattacgagaacttgaagtgatagaagcaacctatgaagatgttattcaagataga
atagctgttaaaaacagagataactactttcatttcaaattaagtgaaatgtcacatatt
acagatcctataatgaatatcaaacaattgtataaaaatgttttagcattgaccaatcac
tcacaaacgtttgaacatcaatttacagatcgagaaattaaaaaattacctgatcaaact
attatcggaactttttatgaagaaatgacgcataaagagttgtcggagttgcagcagaaa
aaagtaacgcaattattgaatgaaattatgagaggtgaccaaacatga
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