Staphylococcus piscifermentans: SAMEA4384060_1746
Help
Entry
SAMEA4384060_1746 CDS
T06938
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00220
Arginine biosynthesis
spic00240
Pyrimidine metabolism
spic00250
Alanine, aspartate and glutamate metabolism
spic01100
Metabolic pathways
spic01110
Biosynthesis of secondary metabolites
spic01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SAMEA4384060_1746 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAMEA4384060_1746 (carB)
00220 Arginine biosynthesis
SAMEA4384060_1746 (carB)
Enzymes [BR:
spic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SAMEA4384060_1746 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
GARS_A
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
SNV05726
LinkDB
All DBs
Position
1:complement(1831106..1834279)
Genome browser
AA seq
1057 aa
AA seq
DB search
MPKNNEIKTILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYKVILVNSNPATIMTDKEI
ADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQLHDSGVLEANNVQLLGTKL
SSIQQAEDRELFRSLMNELDVPVPESDIVNTVEQAFAFKEQVGYPLIVRPAFTMGGTGGG
ICHNDEELKEVVTNGLHYSPATQCLIEKSIAGFKEIEYEVMRDKNDNAIVVCNMENIDPV
GIHTGDSIVVAPSQTLTDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPHSMNYYIIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMLNPVTGTSYAAFEPALDYVISKIPRF
PFDKFEKGERVLGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGESYELDYI
KERILQQDDERLFFIGEAIRRGTTLEEIHEMTQIDYFFLNKFQHIIDIEHELKEHKGDIE
YLKYAKDYGFSDKVIAHRFDMTEDEVTELRKANDIHPVYKMVDTCAAEFESSTPYYYGTY
ERDNESIVTEKEKVIVLGSGPIRIGQGVEFDYATVHAVWAIQNAGYEAIIVNNNPETVST
DFSISDKLYFEPLTVEDVMNIIDLEQPKGVVVQFGGQTAINLADKLAEKGVRILGTSLEN
LNRAEDRKEFEALLNKIHVPQPKGKTATSPAEALENAREIGYPVVVRPSYVLGGRAMEIV
YNDAELENYMREAVKASPEHPVLVDRYLTGKEIEVDAISDGETVIIPGIMEHIERAGVHS
GDSIAVYPPQTLTPDEISTLEDYTTKLAKGLDIIGLINIQFVLAHDGMYVLEVNPRSSRT
VPFLSKITHIPMAQLAMRAILGEKLSDLGYQPGLQPYTKGVFVKAPVFSFNKLKNVDITL
GPEMKSTGEVMGKDLTLEKALFKGLTASGVEVKDHGTVLITVSDKDKDEMVKVAKRLNEV
GYKILATAGTAQKLSEHHIPVETVGKIGGEDDLLTRIQNGEVQIVINTMTKGKTIERDGF
QIRRASVENGVPCLTSLDTANALTNVIESMTFTMKQM
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaataatgaaattaaaacgattttagtaattggctcaggaccgattattatc
ggccaagcagccgaatttgattatgctggaacacaagcctgtcttgctttgaaagaagaa
ggttacaaagtgattctggtcaactctaatccagctacaattatgacggacaaagagatt
gccgataaggtttatattgaaccattaacacatgactttattgcccgtattattcgaaaa
gaacaacctgatgcattgctgccgactttaggcggtcaaacaggtttgaatatggcaatc
caattgcatgacagtggcgtactagaagccaataatgtgcaattattaggaacgaagtta
agttccatccaacaagctgaagaccgtgaactattccgcagcttgatgaatgaattagat
gttccggtaccagaaagtgatattgtcaacactgtcgagcaagcttttgcttttaaagaa
caagtgggttatccattaatcgtaagacctgctttcacaatgggcggtactggcggcggt
atctgtcataatgatgaagaattgaaagaagtcgtcacaaatggcttgcattatagtccg
gctacacaatgtttaattgaaaaatcgattgcagggtttaaagaaattgaatacgaagtg
atgcgcgataagaatgataatgccatcgtagtatgtaatatggaaaatatcgacccagtc
ggtatccatacaggcgactccattgtagtagcaccaagtcaaacgttgacagatgtggaa
taccaaatgttgcgcgatgtttcattgaaagtgattcgtgccttaggtatcgaagggggc
tgtaacgtacaacttgcattagatcctcattctatgaattactacatcattgaagtaaac
ccacgtgtttcacgttcatcagcgttagcttctaaagcaacaggttatccaattgcgaag
ctcgcagcgaaaattgctgtcggtttaactttagatgaaatgttgaatccagttacaggg
acttcatatgccgcatttgaaccagctttagattatgtgatttctaaaattccacgtttc
ccattcgataagtttgaaaaaggagagcgtgtactcggtactcaaatgaaagccactggc
gaagtgatggctatcggcagaacttacgaagaatcattattaaaagcaattcgttcatta
gaatatggcgtgcatcatttaggtttaccaaacggtgaaagttacgaattagactacata
aaagaacgtatcttacaacaagatgacgaacgtctcttctttatcggagaagcgattcgt
cgtggtactacattagaagaaatacatgaaatgacgcaaatcgattatttcttcttaaat
aaatttcaacatattattgatatcgaacacgaattaaaagaacataaaggcgacatcgaa
tatctaaagtatgctaaagattacggtttcagcgataaagtaattgcacatcgattcgat
atgacagaagatgaagtgacggaattgcgtaaagccaacgacatccatccagtgtacaaa
atggtcgatacttgtgcagcagaatttgaatcttcaacaccttattattacggtacttat
gaaagagataatgagtcaatagtaacagagaaagagaaagtcattgtattaggatcaggt
ccaatccgtatcggtcaaggggttgaattcgattacgcaactgtacatgcagtatgggcg
attcaaaatgcaggatacgaagcaattatcgtcaataacaacccagaaacagtatccact
gatttctccatctctgataaattatacttcgaacctttaacagttgaagatgtaatgaat
attattgatttagaacagcctaaaggtgtagtagtgcaatttggcggacaaactgcaatc
aacctggcggacaagttagctgagaagggtgttcgcattttaggaacttctttagaaaac
ttgaatcgtgcagaagatagaaaagaatttgaagcgttactcaacaaaatccatgtgccg
caacctaaaggtaaaacagcaacttctccagcagaagcattagaaaatgcacgcgaaata
ggctatccagtggtcgtacgtccttcatatgtgcttggcggacgtgcaatggaaattgta
tacaacgatgcggaacttgagaattatatgagagaagcggtgaaagcaagtccagaacac
ccggtattagtcgaccgttacttaacaggtaaagaaattgaagtcgacgctatcagtgat
ggtgaaacggtgattattccaggtattatggaacatattgagcgagctggcgtacactca
ggtgactccattgccgtataccctccgcaaacactcacaccagatgaaatcagcacctta
gaagattacacaacgaaattagcaaaaggtttagacatcatcggcttaatcaatattcag
ttcgtacttgcacatgatgggatgtatgtattagaagtgaatcctcgttcaagccgtacg
gtaccattcctaagtaaaatcactcatatcccgatggctcagttggcaatgcgtgctatc
ttaggtgaaaagttaagtgatttaggatatcaacctggacttcaaccttatacaaaaggt
gtctttgtgaaagcaccagtattcagtttcaataaattaaaaaatgtagacattacttta
gggcctgaaatgaaatctacaggtgaagtaatgggtaaagatttaacgttagaaaaggcg
ttattcaaagggttgactgcaagtggcgtagaagttaaagatcacggaacagtcttaata
acagtaagcgataaagataaagacgaaatggttaaagtggcgaaacgtttgaacgaagtc
ggctataaaattttagcgacagcaggcacagctcagaaactttctgaacatcacattccg
gttgaaacagtcggtaaaatcggtggggaagacgacttgttgacacgtattcaaaacggc
gaagtacagattgtcattaatactatgacaaaagggaaaacaattgaaagagatggattc
caaatccgtcgtgcttcagttgaaaacggtgtcccttgcttaacttcattagatacagca
aatgcacttacaaatgtcattgaaagtatgacttttacaatgaaacaaatgtaa
DBGET
integrated database retrieval system
