Staphylococcus piscifermentans: SAMEA4384060_1772
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Entry
SAMEA4384060_1772 CDS
T06938
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00470
D-Amino acid metabolism
spic00550
Peptidoglycan biosynthesis
spic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA4384060_1772 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA4384060_1772 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
SAMEA4384060_1772 (murD)
Enzymes [BR:
spic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SAMEA4384060_1772 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
Precursor biosynthesis
Amino acid ligase
SAMEA4384060_1772 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
Pyr_redox
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
SNV05852
LinkDB
All DBs
Position
1:complement(1862110..1863459)
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AA seq
449 aa
AA seq
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MLKYKGLEGKNVLVVGLAKSGYEAAKLLHRLGANVTVNDGGDLSKDPHAKDLEKMGLKVI
GGHHPLSLLDSNPIIVKNPGIPYSVPLISEAEKRGLKILTEVELSYLISEAPIIAVTGTN
GKTTVTSLIGDMFDKSRQTGLLSGNIGFVASKVAQEAKPDDYLITELSSFQLLGIEQYRP
HIAIITNIYSAHLDYHGTLEDYRNAKRRIYKNQTADDFLICNYNQRHLIETDTLKAKVYY
FSTTQEVDGIYVKDGYIMLNGLRLIHKDDIVLPGEHNLENILAAVLAAVLGGVSIDAVIA
TLTSFSGIKHRLQYIGSNKTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNGFD
ELIPYMKNVRVMITFGETQDKLTKLGESQGKYVIRATDVKDAVNKVQDVIEPNDVVLLSP
ACASWDQYNTFEERGDIFIESFRSHLPSK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatacaaaggtttagaaggaaaaaatgttttagtagtaggattagcaaagagc
ggctacgaagcagctaagttattacatcgtctcggagcaaacgtaactgttaatgatggc
ggcgatctttctaaagacccgcatgccaaagacttagaaaaaatgggattgaaagtaatc
ggcggccaccatccgctttcattattggacagcaatccgattattgttaagaatccaggt
attccatattcagtaccgctcatcagtgaggctgaaaaacgcggattgaaaattttaaca
gaagtagaattaagttatttaatttctgaagcgcctattattgcggtgacaggtactaac
ggcaagactacagtaacatcgcttatcggtgatatgttcgataagagtcgtcaaacagga
ttactatcagggaatatcggttttgtggcatcgaaagtagcacaagaggcgaaaccagat
gattatttaattacagaattgtcttctttccaattattaggaattgaacaatatcgtccg
catatcgctattatcactaatatctactcagcgcatttagattatcatggcacattagaa
gattatcgcaatgcgaaacgtcgcatttataagaaccaaacggcagatgattttctaatc
tgcaattataatcaacgtcatcttattgaaacagatactttgaaagcgaaagtttattac
ttctcaactactcaagaagtagacggtatttatgttaaagacggttatattatgttgaac
ggactcagactgattcacaaagacgatattgtcttgccaggtgaacataatctagaaaat
atcttagcagcagtattggcagcagtgttaggcggcgtatctattgatgcggttattgca
accttgacttctttttcaggaattaaacaccgcttgcaatatataggttcaaataaaacc
aataaatattacaacgactctaaagcaacgaatacgttggcaacacaatttgctttaaat
tcctttaatcaacccattatttggctttgcggcggcttagatagaggaaacggctttgat
gagctcatcccttatatgaaaaacgtccgtgtgatgattacctttggtgaaactcaagat
aaattgactaaattaggagaaagccaaggcaaatatgttatccgtgcaactgatgtgaaa
gatgcagtgaataaagtacaagatgtgattgaaccgaatgacgtggtattactttcacct
gcttgtgccagttgggatcaatacaatacctttgaagagcgcggtgacatctttattgaa
agtttccgctcacatcttccgtcgaagtaa
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