Staphylococcus piscifermentans: SAMEA4384060_1774
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Entry
SAMEA4384060_1774 CDS
T06938
Symbol
pbpA
Name
(GenBank) penicillin-binding protein Pbp1
KO
K12552
penicillin-binding protein 1 [EC:3.4.-.-]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00550
Peptidoglycan biosynthesis
spic01100
Metabolic pathways
spic01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA4384060_1774 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA4384060_1774 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
SAMEA4384060_1774 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SAMEA4384060_1774 (pbpA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
DUF1506
NGO_0222
Motif
Other DBs
NCBI-ProteinID:
SNV05860
LinkDB
All DBs
Position
1:complement(1864558..1866714)
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AA seq
718 aa
AA seq
DB search
MMPKRKIKIKKNKIGAVLLIILFGLLFFLLVLRYSYVMLTGHSSGQDLIMKANQKYLVQQ
QEQPERGKIYDRNGKVLAEDVERFKLTAVVSKKADEGSEKPRHVVDKKKTAEKLATVIDM
KPKEIEKMLDNKKAFQVEFGRKGSDLTYQEKDKIEKMKLPGIMLYPETERFYPNGVFASH
LIGMAQKNPDTGELKGAMGVEKIFDSYLAGKKGALSYIHDIWGYIAPNSKNEVAPQRGDD
VHLTLDSNIQVFVEEALNDLDKHFEPKDAFAVVMDAHTGEILAFSQRPTFNPETGKDFGK
TWANDLYQNTYEPGSTFKTYGLAAAIQEGKFKPDEKYMSGHKDIMGSKISDWNRTGWGKI
PMSLGFTYSSNTLMMHLQDLVGADKMKSWYEKFGFGKKTGGLFDGEAPGGIAWDNELQQK
TSAFGQSTTVTPAQMLQAQSAIFNKGNMVKPWYVNSIDNPVKDKSLYKGKREIAGKPITA
ATAEKVNKQLDLVVNSKQSHAMNYRIHGYRIGGKTGTAQVADPDNGGYVDGPFPYFVSFI
GHAPSKNPKVIVYAGMSLAQKNKQEAYEMGASKAFNPIMENTLKYLNVGKNSETSSKDTF
SKIPDVSNETVQKAEDTLKSKNLKPVVIGQGDKVTQQAPSTTEKIIPHSKVLLKTDGDMT
MPDMKNWSKDDVIAFESLTGINVKMKGSGFVSKQSVSPNESLQGKKEITIELSAPDAS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgaagcgaaaaattaaaattaaaaaaaataaaataggggcagtcctcctcatc
attttgttcggactgctcttttttctattggttttaagatatagttatgtcatgttaacc
ggacattcctccggccaagacttaattatgaaagccaatcagaaatatctcgtacaacaa
caagaacaacccgagcgagggaaaatctatgatagaaatgggaaagtccttgcggaagat
gtagaaagatttaaattaactgccgtagtcagcaaaaaagctgacgaaggttcagaaaaa
ccgcgtcatgttgtcgataagaagaaaacagcagagaagttagctaccgtgattgatatg
aagcctaaagaaatagagaaaatgcttgataataaaaaagcgttccaagttgagttcggc
cgaaaaggcagtgatttgacttaccaagaaaaagataagatagaaaaaatgaaattacca
ggtattatgttataccctgaaacagaacgattttatcctaatggcgtttttgcctctcat
ttaatcggtatggcacaaaagaatccggacacaggagagttaaaaggcgcgatgggcgtt
gaaaagatatttgacagttatctcgcaggtaagaaaggggcattatcctatattcatgat
atatggggatatatcgctccgaattctaaaaacgaggtagccccgcaacgtggcgatgat
gtacacttgaccttggattcgaatattcaagtatttgtagaagaagcattaaatgacctg
gacaagcactttgaacctaaagatgcatttgcggtagttatggatgcgcatacgggtgaa
attttagcattcagtcaaagaccaaccttcaaccctgaaacaggtaaagatttcggtaaa
acttgggcgaatgatttatatcaaaatacttatgaaccaggttctacattcaaaacgtac
ggtttagcagcagcgattcaagaagggaaattcaaacctgacgaaaaatacatgtctggt
cacaaagacattatgggttcgaaaatttccgactggaatagaacaggttggggtaaaatt
ccaatgagtttaggatttacttactcttctaataccttgatgatgcatctgcaagattta
gtcggtgcagacaaaatgaaatcctggtatgaaaaattcggtttcggtaagaaaacaggc
ggtttatttgacggagaagcgccaggtggtatcgcttgggataacgaactgcaacaaaaa
acttcagcgttcggtcaatccacaacagtaacaccagctcaaatgttgcaagcgcaatca
gcaattttcaacaaaggtaatatggtgaaaccttggtatgtcaacagtattgataatccg
gtcaaagataaatcattatataaaggtaaaagagaaattgcaggaaaacctattactgca
gctacagctgaaaaggtaaataaacagttggatttagtagtcaatagtaaacaaagtcat
gcaatgaactatcgtattcatggatatagaataggcggtaaaaccggtacagcacaggtt
gccgatccagataacggcggctatgttgacggacctttcccttattttgtaagctttatt
ggacatgcgccaagtaagaaccctaaagttatcgtctatgcaggtatgagtttggcacag
aaaaataaacaagaagcttatgaaatgggtgccagcaaggcgtttaatccaattatggaa
aataccttgaaatatctgaatgtcggcaagaacagcgaaacttcatctaaagatacgttc
agtaaaattcctgatgtatctaatgaaacagttcaaaaagctgaagatactttaaaatct
aaaaacttaaaaccagtggtcatcggacaaggtgataaagtgacacagcaagcaccaagc
actactgaaaaaattattcctcatagtaaagtattgttgaaaacagatggtgatatgaca
atgcctgatatgaaaaattggagtaaagatgatgtgattgcttttgaatcattgactgga
attaatgttaaaatgaaaggaagcggatttgtttccaaacaatctgtcagtccaaatgaa
tcgctgcaaggcaagaaagaaattacaattgaactttctgcaccagatgccagctaa
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