Staphylococcus piscifermentans: SAMEA4384060_1978
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Entry
SAMEA4384060_1978 CDS
T06938
Symbol
oppD
Name
(GenBank) oligopeptide transport system ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
spic
Staphylococcus piscifermentans
Pathway
spic01501
beta-Lactam resistance
spic02010
ABC transporters
spic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4384060_1978 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384060_1978 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA4384060_1978 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spic02000
]
SAMEA4384060_1978 (oppD)
Transporters [BR:
spic02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SAMEA4384060_1978 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_15
TniB
AAA_29
DUF87
AAA_23
ABC_ATPase
AAA_16
RsgA_GTPase
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
SNV06923
LinkDB
All DBs
Position
1:complement(2066000..2067082)
Genome browser
AA seq
360 aa
AA seq
DB search
MAERILEVNDLHVSFDIDAGEVQAVRGVDFYLNKGETLAIVGESGSGKSVTTKALTKLFQ
GDVGRIKKGRIDFLGEDLVNKPEKELIKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLM
KHRGFNKTQAKKRALEILDMVGLPNAKERFKAYPHQFSGGQRQRIVIATALACEPKVLIA
DEPTTALDVTMQAQILDLMKELQKKIDTAIIFITHDLGVVANIADRVAVMYGGQMVETGD
VDEIFYDPQHPYTWGLLSSMPDLETGTETELVAIPGTPPDLLHPPKGDAFAARSQYALGI
DFKEAPPWFQVSPTHFVKSWLLDERSPKVQPPELVVKRQRAMPNKFEHAERVERVAFNEG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagaatattagaagtaaacgacttgcatgtctcctttgatatcgacgcagga
gaagtgcaagcagtcagaggcgtagatttttatttaaacaaaggggaaactttagcgatt
gtaggagaatctggttctggtaaatcagtgactacaaaagcattaacaaagttgttccaa
ggtgatgtcggacgtattaaaaagggcagaatcgactttttaggagaagacttagttaac
aagccggaaaaagagctgattaaactaagaggaaaagatatttctatgattttccaagac
ccgatgacttctttgaatcctacaatgcaaattggcaagcaagttatggaacctttgatg
aaacaccgaggatttaataaaacgcaagctaagaagagagcgctggaaatcttagatatg
gtgggacttcctaatgctaaagagcgttttaaagcttatcctcaccaattctcaggagga
caaagacagcgtattgttatcgcaactgctttagcttgcgaacctaaagtactcattgca
gacgagccgacaacggctttagacgtaacaatgcaggctcaaattctagatttaatgaaa
gaattgcaaaagaaaatcgatacggccattatctttatcacacatgacttaggggtcgtc
gcaaatattgcagacagagttgcagtgatgtatggcggtcaaatggtagaaacgggagat
gtagatgaaatcttctacgacccgcaacatccatatacgtggggattattatcttctatg
cctgacttagagacaggtactgaaacagaactagtggctattccaggtacaccacctgac
ttattacatccacctaaaggggatgcctttgcagccagaagccaatatgctttaggtatc
gattttaaagaagcaccgccatggttccaagtttcaccgacgcattttgtaaaatcatgg
ctgttggatgaacgttctcctaaagtacaaccgccagaattggtggttaaacgtcaaaga
gcaatgccgaataaatttgagcacgctgaacgtgtagaaagggtggcgttcaatgaagga
taa
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