Staphylococcus piscifermentans: SAMEA4384060_2106
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Entry
SAMEA4384060_2106 CDS
T06938
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spic03019
]
SAMEA4384060_2106
Messenger RNA biogenesis [BR:
spic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMEA4384060_2106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_22
ABC_tran
DUF1186
AAA_16
SLFN-g3_helicase
nSTAND3
Rad17
AAA_29
AAA_28
nSTAND1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
SNV07644
LinkDB
All DBs
Position
1:complement(2190754..2191707)
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AA seq
317 aa
AA seq
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MSEFKQDGGKMQHEENEVVNKSELLVVTGMSGAGKSVVLQSLEDLGYFCVDNLPPILLPK
FVELMEQGNPSLQKVAIAIDLRGQEFFKSLVKEVDLLRSQNHVIVDVMFVEASEAKLISR
YKETRRAHPLNDNGQRSLIDAIQEEKHLLSEIRSFANFVIDTTALKPKELRAQIDELFNR
DNIETFSISVTSFGFKHGIQQDADLVFDVRFLPNPFYVKELRPLTGVDDAVYQYVMKWQE
TAIFYDKLLDLLKFMIPGYKKEGKTQLVIAIGCTGGQHRSVALAKRLAEDLNESYDYNVY
VHHRDAHIESGVENEKG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttaaacaggatggtggcaaaatgcaacatgaagaaaatgaagtcgtaaat
aaaagtgaattattagtagttaccggtatgtcaggtgcagggaagtctgttgtgcttcaa
agcttagaagatttaggatatttttgtgtggataatttaccgccgattttacttcctaag
tttgtagaattgatggaacaagggaatccgtcactgcaaaaagtagcgattgcgatcgac
ttacgcgggcaagaatttttcaaatccttagttaaagaagtagacttacttcgcagtcaa
aaccatgttattgtagatgtgatgtttgtggaagcgagtgaagctaagctgatttctaga
tataaagaaacacgtcgtgcgcatccattaaatgataatggacaacgttctttgatagat
gcgattcaagaagaaaaacacttattatcagaaatccgtagttttgcaaactttgtcata
gatacaacagcacttaaacctaaagaattacgcgcgcaaatagatgagttgttcaatcga
gataatattgaaactttcagtatcagtgtgacaagttttgggtttaaacatggtattcaa
caagatgcagatttagtatttgatgtgcgttttttacctaatccattttacgtaaaagaa
ttgagacctttgactggggtagatgacgcagtctatcaatacgtcatgaaatggcaagag
acggctatcttttatgacaagttgttagatttattgaagtttatgattccgggatacaag
aaagagggcaagacacagctagtgattgcaataggctgtactggtggacaacatcgttcg
gttgccttagcgaaacgtcttgccgaggatttaaacgaaagttatgactataatgtgtat
gtccatcatcgggatgcacatattgaaagtggcgtggagaatgaaaaaggttaa
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