Staphylococcus piscifermentans: SAMEA4384060_2290
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Entry
SAMEA4384060_2290 CDS
T06938
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4384060_2290 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_2290 (ung)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAMEA4384060_2290 (ung)
DNA repair and recombination proteins [BR:
spic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4384060_2290 (ung)
Prokaryotic type
SAMEA4384060_2290 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SNV08830
LinkDB
All DBs
Position
1:complement(2378768..2379433)
Genome browser
AA seq
221 aa
AA seq
DB search
MNWSEVFHDITSRHDFKAMHDFLDKEYSTKTVYPDKENIYQAFDLTSFDKVKVVIIGQDP
YHGPKQAHGLAFSVQPEGKFPPSLRNMYKELEDDIGCRRTVSHLQDWAREGVLLLNTVLT
VRKGEAASHRNIGWEVFTDEIIKAVSEYRDHVVFILWGKPAQQKERLIDTSKHAVIKSVH
PSPLSAYRGFFGSKPYSKANAYLEKIGETPIDWCGEEAQRG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtcagaagtgtttcatgacattacaagtcgacacgattttaaagcaatgcat
gattttttagacaaagaatattcaactaaaacggtttatccagataaagaaaatatatat
caagccttcgatttaacatccttcgacaaagtgaaagtcgttattatcggtcaagatcct
tatcatggcccgaaacaagctcatggtttagctttttcagtgcagccagaaggaaaattc
ccgccatctttacgcaacatgtataaggaattagaagacgatatcggatgcagacgtacg
gtatcgcatttgcaagactgggccagagaaggcgtcttgctcttaaacaccgttttaact
gtacgtaaaggcgaagcggcctcacaccgtaatattggctgggaagtttttacagacgag
attatcaaagcggtttctgagtatcgtgaccatgtcgttttcattttatggggcaaacct
gcgcaacaaaaggaaagactgattgatacatcaaaacatgcagtgattaaatctgtacat
ccaagtcccttatcagcttatcgcggtttcttcggctctaagccatattctaaagcgaat
gcatatttagaaaaaatcggcgaaacaccgatcgattggtgcggagaggaggcgcagcgt
ggataa
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