Staphylococcus piscifermentans: SAMEA4384060_2417
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Entry
SAMEA4384060_2417 CDS
T06938
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic03030
DNA replication
spic03430
Mismatch repair
spic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384060_2417 (dnaX)
03430 Mismatch repair
SAMEA4384060_2417 (dnaX)
03440 Homologous recombination
SAMEA4384060_2417 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spic03032
]
SAMEA4384060_2417 (dnaX)
03400 DNA repair and recombination proteins [BR:
spic03400
]
SAMEA4384060_2417 (dnaX)
Enzymes [BR:
spic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384060_2417 (dnaX)
DNA replication proteins [BR:
spic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4384060_2417 (dnaX)
DNA repair and recombination proteins [BR:
spic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4384060_2417 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DNA_pol3_gamma3
AAA_5
AAA_30
AAA_16
AAA_22
TIP49
ResIII
Mg_chelatase
AAA_14
nSTAND3
AAA_assoc_2
AAA_19
AAA_7
PIF1
RCF1-5-like_lid
AAA_2
TniB
AAA_18
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
SNV09480
LinkDB
All DBs
Position
1:complement(2503174..2504925)
Genome browser
AA seq
583 aa
AA seq
DB search
MNYQALYRMYRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAK
AINCPNSVDGEPCNECDICRSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQSKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGL
EQIIERLRYVAESQHIEYDEEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNV
TGSVDEASLNALLNDVAHGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKTAQR
ETEYGALMAFDLDTLYKMIDLINDTLVSVRFSVNQNVHFEVLLVKMAELIKEDNAPVANP
DMHSANAHQASAEPQPVQQNNDVNSALLQRLEHLEQELNALKQHGVTTTNTPPKQKSNSR
GRRRSKNSYSMTQIAKVLDNANKEDIKLLKNHWQEVIDHAKNHNQKALVSLLQNSIPVAA
SEKSVLVQFEAEIHCEIVNDDDEKRGSLEEVVRNIINKNVSVVGVPADQWLQVRSEYIKN
RKRGGNNQAGEDANEPEQPKEVDIVQKAKDMFGEETVHLTDED
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgaactatcaagctttatatagaatgtaccgacctcaaagtttcgatgatgtggtcggt
caagagcatgtaaccaagacgctccgtaatgctattgctaaaggcaaacaatcgcatgca
tacatcttcagcggtccaagagggacagggaagactagtattgcgaaggtttttgcgaaa
gccattaattgccctaatagtgtagacggagaaccctgtaatgaatgtgatatctgtagg
agtattacacaaggttccaattcagatgtcattgaaatcgatgcggcgagcaataatggg
gtcgacgaaattagaaatatccgtgataaagtgaaatacgcaccatcgcaatcaaaatat
aaagtctacattatagatgaggttcatatgctgacaacaggtgcattcaatgccttgttg
aaaaccctagaagaaccaccagcacacgccatctttattctggcgactacagagcctcat
aagattcctcctactattatttcaagagcgcaacgttttgattttaaagccattggttta
gagcaaattatcgagcgtttacgttatgtagcagaatcgcagcatattgagtacgacgaa
gaagcaattgctttcattgcaaaagcttctgaaggcggcatgcgtgatgcattaagtatc
atggaccaagctattgcattcggcgatgaacatttaaccttgcaagatgccttgaatgtg
actggtagcgtagatgaagcttcattaaatgccttgttgaatgatgtagcccatggccaa
gtcaaagatgcctttgcgcgctaccatcaatttatcgctgaaggtaaagaagtgaatcgt
ttaattaatgatttgatttattttgtacgcgataccattatgaataaaacagcacagcga
gaaacagaatatggcgctttgatggcgtttgatttagatacgctatataaaatgattgat
ttaatcaatgatacattagtatctgtgcgtttcagcgtaaatcagaatgtacactttgaa
gtgctgttggtcaaaatggccgagttgattaaagaagataatgcgcctgtagcgaaccca
gatatgcattctgctaatgcacatcaagcatcggctgaaccccaacctgttcagcaaaat
aacgatgtgaacagtgcgttacttcaacgcttggaacacttagaacaagagttgaatgca
ttgaaacaacatggtgtgacgacgactaatactccgcctaaacaaaaaagtaattcacgc
ggacgtcgcagaagtaagaactcttattctatgacgcaaattgcaaaagtgctagataat
gcgaataaagaagatatcaagcttttgaagaatcactggcaagaagtcattgatcacgct
aaaaatcacaatcaaaaagcattggtcagcttattacagaattctattccagtagctgca
agcgaaaaaagcgtgttagtgcaatttgaagcggaaattcattgtgaaattgtgaatgac
gatgatgaaaaacgcggcagcttagaagaagttgtacgtaacatcatcaataaaaatgtt
tcggtagtaggtgtgccagcagaccaatggttgcaagtacgttctgaatacatcaagaac
cgtaaaagaggcggaaacaatcaagcaggagaagacgctaacgaaccagagcagcccaaa
gaagtggatattgtgcaaaaagctaaagacatgtttggcgaagagaccgttcaccttaca
gatgaagattaa
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