Streptomyces phytohabitans: ABXR15_01615
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Entry
ABXR15_01615 CDS
T10861
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
spih Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spih03021
]
ABXR15_01615
Transcription machinery [BR:
spih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABXR15_01615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_Crp_2
LacI
DUF7343
KORA
Motif
Other DBs
NCBI-ProteinID:
XCX47974
LinkDB
All DBs
Position
complement(425504..426361)
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AA seq
285 aa
AA seq
DB search
MDSPTFRRATARHPHDDAPDTDADFVRLSRLPEGSEREALRARLVEQWLPMAHRLARRYG
GRGEASEDLAQVAALGLVKAVRAYEPERGVPFVSYAIPTVVGEIKRHFRDRTWAVHVPRR
VQELRNRVRSADRDMSTGDGRAPTVAELSAGTGLSEDDVREGQGAMQSYSSLSLDAPVSD
TDATNLLVDTMGGVDDGYETVLAREAVRPYLAELPERERYILYLRFFREMTQSGIAEEIG
VSQMHVSRLLSGSCRQIRERVEDARSDDEADDGAAAVPAALPAAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggacagcccgaccttccgccgcgcgaccgcgcgtcacccgcacgacgacgcccccgac
accgacgcggacttcgtgcggctcagccgactgcccgagggctccgaacgggaggcgctg
cgcgcccggctcgtcgagcagtggctgccgatggcccaccggctggcccgccgctacggc
ggccggggtgaggcgtccgaggatttggcgcaggtcgcggcactgggtctggtcaaggcc
gtgcgggcctacgagccggaacggggcgtgcccttcgtctcgtacgccatccccaccgtc
gtcggtgagatcaagcggcacttccgcgaccgcacctgggcggtgcacgtgccccgccgg
gtgcaggagctgcgcaaccgggtccgttcggccgaccgcgacatgagcaccggcgacggc
cgcgcgccgaccgtggcggagctgagcgcgggcaccgggctgagcgaggacgacgtacgg
gaggggcagggcgcgatgcagagctacagctccctctccctcgacgcgcccgtctccgac
accgacgcgaccaacctgctcgtcgacacgatgggcggcgtcgacgacgggtacgagacc
gtgctcgcccgcgaggccgtccggccgtacctggcggagctgcccgaacgcgagcggtac
atcctctacctgcgcttcttccgcgagatgacgcagagcggcatagcggaggagataggc
gtgtcgcagatgcacgtctcccgtctgctgtccgggagctgccgtcagatccgcgagcgg
gtcgaggacgcccgttccgacgacgaggccgacgacggcgcggccgccgtacccgcagcc
ctgcccgccgcggcctga
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