Streptomyces phytohabitans: ABXR15_05155
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Entry
ABXR15_05155 CDS
T10861
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
spih Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spih03032
]
ABXR15_05155
03400 DNA repair and recombination proteins [BR:
spih03400
]
ABXR15_05155
Enzymes [BR:
spih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABXR15_05155
DNA replication proteins [BR:
spih03032
]
Prokaryotic type
DNA Topoisomerases
ABXR15_05155
DNA repair and recombination proteins [BR:
spih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABXR15_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XCX48600
LinkDB
All DBs
Position
complement(1247134..1249260)
Genome browser
AA seq
708 aa
AA seq
DB search
MTAETSVPSSTALLSGADRDGGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLLHCLW
EIIDNSVDEALGGHCDRIDVTLHEDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAG
GKFGGGSYAASGGLHGVGASVVNALSARLDVEVDRDGRTHSVSFRRGVPGIFTESGPDAP
FDPSGGLLQGKKIPKSRTGTRVRYWADRQIFLKDARLSLETLHGRARQTAFLVPGLTLVV
RDERGLDGEPPAEEVFRYDGGISEFCEYLAQDRPVCDVLRLQGEGTFKETVPVLDDRGHM
IPTEVQRELTVDIALRWGTGYDTTVRSFVNIIATPKGGTHVSGFERSLTRTVNDVLRASK
LLRVAEDDVAKDDATEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVSQVVARELKGFL
TSTKRDDKQQARSVLDKVVAAARTRIAARQHKEAQRRKTALESSALPAKLADCRSDEVER
TELFIVEGDSALGTAKVARNSEFQALLPIRGKILNVQKSSVSDMLKNAECGSIIQVIGAG
SGRTFDIDQARYGKVIFLADADVDGAHIRCLLLTLFQRYMRPMVEQGRVFSAVPPLHRVE
LTHPKKGQDKYVYTYSDNELRQTLLELERTGVRYKDSVQRYKGLGEMDADQLAETTMDPR
HRTLRRINISDLEAAEEAFSLLMGNDVAPRREFITGSAATLDRSRIDV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagacgtccgtgccgtcgtccaccgccctgctgtccggagcggaccgcgac
ggcggctccaactacaccgctcggcacctgctggtcctcgaaggactcgaagcggtgcgc
aagcgccccggaatgtacatcggctcgaccgacagccggggtctgctgcactgcctctgg
gagatcatcgacaactccgtcgacgaggcgctcggcggccactgcgaccgtatcgacgtg
accctccacgaggacggctccgtcgaggtgcgggacaacgggcgcggcatccccgtcgac
gtggagcccaagaccgggctgtccggcgtcgaggtcgtgatgaccaagctgcacgcgggc
ggcaagttcggcggcggctcgtacgccgcttccggcggtctgcacggcgtcggcgcctcc
gtggtcaacgcgctgtccgcgcggctcgacgtggaggtcgaccgcgacggccgtacgcac
tcggtgagcttccggcggggcgtgcccggcatcttcaccgagtccgggccggacgcgccg
ttcgacccgtcgggcgggctgctccaggggaagaagatccccaagagccgtacgggcacc
cgcgtccgctactgggcggaccggcagatcttcctcaaggacgcccgcctgtccctggag
acgctgcacgggcgggcccgccagacggcgttcctggtgcccggcctgacgctcgtcgta
cgggacgagcgcggcctggacggcgagccgcccgccgaggaggtcttccgctacgacggc
gggatcagcgagttctgcgagtacctggcgcaggaccggcccgtgtgcgacgtgctgcgc
ctccagggcgagggcacgttcaaggagaccgtccccgtcctggacgaccgcggccacatg
atcccgacggaggtgcagcgcgagctgaccgtcgacatcgcgttgcgctggggcaccggt
tacgacaccacggtccgctcgttcgtgaacatcatcgcgacgcccaagggcggcacccac
gtgtcgggcttcgagcgctcgctgacgcggacggtgaacgacgtgctgcgcgcgtcgaag
ctgctgcgcgtggccgaggacgacgtggcgaaggacgacgcgacggagggcctgacggcg
gtcgtgaccgtacggctcgcggagccgcagttcgaggggcagaccaaggaggtgctgggc
acctcggccgcgtcgcggatcgtgtcgcaggtggtggcccgggagctgaagggcttcctg
acgtcgacgaagcgggacgacaagcagcaggcccgttccgtgctggacaaggtcgtcgcg
gcggcccgtacgcgcatcgcggcgcggcagcacaaggaggcgcagcggcgcaagaccgcc
ctggagtcctccgcgctgcccgcgaagctggcggactgccggagcgacgaggtggagcgt
acggagctgttcatcgtggagggcgactccgcgctgggtacggcgaaggtggcgcggaac
tcggagttccaggcgctgctgccgatccgcggcaagatcctcaacgtccagaagtcgtcc
gtctcggacatgctgaagaacgccgagtgcggttcgatcatccaggtcataggagcgggt
tccggacggaccttcgacatcgaccaggcccggtacggcaaggtgatcttcctcgccgac
gcggacgtcgacggcgcgcacatccgctgcctgctgctcaccctcttccagcgctacatg
cgcccgatggtcgagcagggccgggtcttctccgccgtgccgccgttgcaccgggtggag
ctgacgcacccgaagaagggccaggacaagtacgtgtacacgtactcggacaacgagctg
cggcagaccctgctggagctggagcgcaccggcgtccgctacaaggactccgtccagcgc
tacaagggcctcggggagatggacgccgaccagctcgcggagaccaccatggacccgcgg
caccgcaccctgcggcggatcaacatcagcgacctggaggccgccgaggaggcgttcagc
ctgctgatggggaacgacgtggcgccgcggcgcgagttcatcaccgggtcggcggcgacg
ctggaccggtcgcgcatcgacgtctga
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