Streptomyces phytohabitans: ABXR15_05340
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Entry
ABXR15_05340 CDS
T10861
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spih Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spih03016
]
ABXR15_05340 (miaB)
Enzymes [BR:
spih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ABXR15_05340 (miaB)
Transfer RNA biogenesis [BR:
spih03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ABXR15_05340 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
B12-binding
TRAM
Motif
Other DBs
NCBI-ProteinID:
XCX48635
LinkDB
All DBs
Position
complement(1296433..1297938)
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AA seq
501 aa
AA seq
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MTAQDTQTRSYEIRTFGCQMNVHDSERMAGLLEDAGYVRAPADADGADVVVFNTCAVREN
ADNRLYGNLGQLVPKKAARPGMQIAVGGCLAQKDRDTITRKAPWVDVVFGTHNVGKLPVL
LERARVENEAQVEIAESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFCIVPQLRGKEK
DRRPGDILAEVEALVDEGVSEITLLGQNVNAYGSDIGDREAFGKLLRACGRIDGLERVRF
TSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSSRLLKAMRRSYRQERYLDIIEKVRAA
MPEAAISTDIIVGFPGETEEDFQETLHVVREARFAQAFTFQYSKRPGTPAAEMDGQVPKA
VVQERYERLVELQEEISWAENKRQLGRTLEVMVAEGEGRKDGATRRLSGRAPDNRLVHFA
ADGLSVRPGDLATVEITYAAPHHLLAEGPASAVRRTRAGDAWERRNAAPQPAPGVLLGLP
TVGVPTAEPAASGTGGGCTAC
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaggacacccagacacgaagctacgagatccgcacgttcggctgccagatg
aacgtccacgacagcgagcgcatggcgggcctgctggaggacgccggatacgtgcgcgcg
cccgcggacgccgacggcgccgacgtggtggtgttcaacacctgcgcggtgcgcgagaac
gcggacaacaggctgtacggcaacctcggccagctcgtgccgaagaaggccgcccggccc
ggcatgcagatcgccgtgggcggctgcctggcgcagaaggaccgcgacacgatcacgcgg
aaggcgccgtgggtcgacgtcgtcttcggcacccacaacgtcggcaagctccccgtactg
ctggagcgcgcccgggtggagaacgaggcgcaggtcgagatcgcggagtccctggaggcg
ttcccctcgacgctgccgacgcggcgcgagagcgcgtacgccgcgtgggtctcggtctcc
gtcggctgcaacaacacctgcaccttctgcatcgtcccgcagctgcgcggcaaggagaag
gaccgccgtcccggcgacatcctcgcggaggtggaggccctcgtcgacgagggcgtcagc
gagatcaccctgctcggacagaacgtcaacgcgtacggcagcgacatcggcgaccgcgag
gcgttcggcaagctgctgcgcgcgtgcggccggatcgacggactggagcgcgtccgcttc
acctcgccgcacccgcgcgacttcacggacgacgtgatcgcggcgatggccgagacgccg
aacgtgatgccgcagctccacatgccgctccagtccggctcgtcacggctgctgaaggcg
atgcgccgctcgtaccggcaggagcgctacctcgacatcatcgagaaggtccgcgccgcg
atgcccgaggccgcgatctccaccgacatcatcgtgggcttccccggcgagaccgaggag
gacttccaggagacgctgcacgtggtgcgcgaggcgcgcttcgcgcaggcgttcaccttc
cagtacagcaagcgcccggggacgcccgccgccgagatggacgggcaggtgccgaaggcc
gtcgtgcaggagcgctacgagcggctggtggagctccaggaggagatctcctgggcggag
aacaaacggcagctcggccgcaccctggaggtcatggtcgcggagggcgaggggcgcaag
gacggcgccacgcgccgcctgtcgggccgcgcgcccgacaaccgcctcgtgcacttcgcc
gcggacggcctgtccgtacgccccggcgacctcgccacggtcgagatcacgtacgccgcc
ccgcaccacctcctcgccgagggcccggccagcgccgtgcggcgtacgcgcgcgggcgac
gcctgggagcgccgcaacgccgcgccgcagcccgcgccgggcgtgctgctcgggctgccg
accgtgggcgtgccgacggcggagcccgcggcgtcgggcacgggcggcggctgcacggcc
tgctag
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