Streptomyces phytohabitans: ABXR15_05460
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Entry
ABXR15_05460 CDS
T10861
Name
(GenBank) HAMP domain-containing protein
Organism
spih Streptomyces phytohabitans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
Laminin_II
GLE1
VpsR
OKR_DC_1_N
ATG14
Sipho_Gp157
UPF0242
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
XCX48659
LinkDB
All DBs
Position
complement(1330674..1336298)
Genome browser
AA seq
1874 aa
AA seq
DB search
MESGAATRGTTTRAKGGRSRKSGTVEVDAASLNRLLNALSSMRDGNFRKRLTVTGDGPMA
EIAAVYNDVADRNLHLTSELARVRRVVGRDGKLTERLETGACEGAWAAAIDGSNALVDDL
VRPVSEVGRVLTAVAEGDLEQRMDLRAPGTEGAAHPLRGEFLKVGRTVNGLVDQLSAFTD
EVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMASRLTAQVRDIALVTTAVAKGD
LSRKVTVHVAGEMLELKNTVNTMVDQLSSFQSEVTRVAREVGTEGELGGQAQVEGVAGVW
KDLTDSVNLMAGNLTSQVREIAQVTTAVASGDLSQKITVNARGEVAQLAETINAMTETLR
TLADEVTRAASEVGTEGVLSGQAQVPGAAGIWKDLTDSVNSAFRNLTAQVRDIAQVTTAV
ANGDLSQKVTVDVSGEMQDLKNTVNTMVDQLRSFGDEVTRVAREIGVEGELGGQAQVPGA
AGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTMV
DQLSAFAEQVTRMARDVGTEGRLGGQARVDGVSGTWKDLTDSVNSMAGNLTSQVRQIAQV
TTAVARGDLSQKIQVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEGRLGGQAQ
VPGVAGVWRDLTDSVNGMAGNLTAQVRNISQVATAVARGDLSQKIDVDARGEILELKTTI
NTMVDQLSSFAEQVTRVAREVGTDGILGGQAEVKGVAGTWKDLTQSVNFMANNLTSQVRN
IAEVTTAVAQGDLSKKITVDAKGEILALVTTVNTMVDQLSSFAEQVTRVAREVGTEGQLG
GQARVRDVSGIWKDLTDNVNLMANNLTGQVRNISQVAGAVANGDLTKKVTVKASGEVAQL
ADTVNTMVTTLSSFAEQVTRVAREVGTDGVLGGQARVVGVAGTWKDLTESVNSMASNLTG
QVRNIAMVTTAIAQGDLTKKIDIEASGEILELKTTINTMVDQLSLFAEQVIRVAREVGTE
GQLGGQARVRDVAGTWQDLTESVNEMANNLTSQVRSISDVATAVTRGDHNVRIDVDASGE
ILELQGYINSMITNLRETTLANKEQDWLKSNLARISALMQGRRDLTDVASLIMSELTPVV
SAQHGAFFVAVPVGSGKEGIGGGEIGAVTGENVSYELRMLGSYGYAMGTMPTTFGPGETL
IGTAAEQKRTILVEHAPPGYLKISSGLGEAPPSHVIVLPVIFEGTVLGVVELAAFQPFTQ
IQKDFLSQIAEVIATSVNTISVNTKTEVLLRQSQELTEQLQERSGELENRQKALQESNEQ
LAEKAEQLAQTNSEIEIKSREIEEARQVLEERAEQLSVSMRYKSEFLANMSHELRTPLNS
LLILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMEVTPTRIA
LVQLVDYVEATFRPLTAEKGLDFSVRVSPELPVTLNTDEQRLLQVLRNLLSNAVKFTETG
AVELVIRSAGESVPDYVREQMLEHGSLREADADLIAFSVTDTGIGIAQSKMLVIFEAFKQ
ADGTTSRKYGGTGLGLSISREIAGLLGGEIHAVSEPGRGSTFTLYLPLQPAELPPQGYPQ
LTTAAKPALAPAPRPEPTVPGAVSEPEPGADGGRGAESGEVPDGVEDAAGDPADGDASAL
PEEDTGGPEADAQRAAASLAHRRRHRAGRRSELGPPLTEQQFPDRMAAQGGESWRNNGQD
LVRPEPTPAFHGQKVLIVDDDIRNVFALTSVLEQNGLQVLYAENGREGIEVLEQHDDAAV
VLMDIMMPEMDGYATTAAIRRMPQFEGLPIIALTAKAMKGDREKSIEAGASDYVTKPVDT
DHLLSVMGQWMDTR
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcgcggtacgacgacgcgcgcgaagggcgggcgctcccgt
aagagcggcacggtcgaggtcgacgcggcttccctgaacagactgctgaacgcgctgtcg
tcgatgcgggacgggaacttccgcaagcggctgaccgtcaccggcgacggcccgatggcg
gagatcgccgcggtctacaacgacgtggccgaccgcaacctgcatctgaccagcgagctg
gcccgggtacgccgggtcgtgggccgggacggcaagctcacggagcggctggagacgggc
gcgtgcgaaggtgcctgggcggccgcgatcgacgggtcgaacgccctcgtggacgacctc
gtacggccggtctcggaggtcggccgggtgctgaccgcggtggccgagggcgacctggag
cagcggatggacctccgcgcaccggggacggagggggcggcgcacccgctgcggggcgag
ttcctgaaggtcggccgtacggtcaacgggctcgtcgaccagctgtccgcgttcaccgac
gaggtgacgcgggtggcgagcgaggtcggtacggagggcaagctgggcgggcaggcgcgg
gtgcgcggcatgtccggctcctggaaggacctgaccgactccgtcaacacgatggcgtcc
cggctgaccgcccaggtgcgggacatcgcgctggtgacgacggcggtggcgaagggcgac
ctctcgcggaaggtcacggtccacgtggccggcgagatgctcgagctgaagaacaccgtg
aacacgatggtggaccagctgtcttcgttccagtccgaggtgacgcgcgtcgcgcgggag
gtcggcaccgagggcgagttgggcggtcaggcgcaggtcgagggtgtcgcgggggtgtgg
aaggacctgaccgactccgtgaacctgatggcgggcaacctcacgtcgcaggtgcgggag
atcgcgcaggtcaccacggccgtggcgagcggtgacctgtcgcagaagatcacggtgaac
gcgcggggcgaggtggcgcagctcgccgagacgatcaacgcgatgacggagacgctccgt
acgctcgcggacgaggtgacgcgggccgccagcgaggtcggtacggagggcgtgctcagc
ggtcaggcgcaggtgccgggcgcggcgggcatctggaaggacctgacggactccgtcaac
agcgcgttccggaacctgaccgcgcaggtgcgggacatcgcgcaggtgacgacggcggtg
gccaacggcgatctgtctcagaaggtcaccgtggacgtgtccggcgagatgcaggacctc
aagaacaccgtcaacacgatggtcgaccagcttcgctcgttcggtgacgaggtgacccgc
gtcgcgcgggagatcggcgtcgagggcgagctgggcggtcaggcgcaggtgccgggcgcg
gccggtacgtggaaggacctgacggactcggtcaacaccgcgttccgcaacctcaccggc
caggtacggaacatcgcgcaggtgacgacggcggtggccaacggcgatctgtcgcagaag
gtcaccgtggacgtgtccggcgagatgctccagctgaagaacaccgtcaacacgatggtc
gaccagctgtccgccttcgcggagcaggtcacgcggatggcgcgcgacgtgggtacggag
ggccgcctcggcggccaggcgcgcgtggacggggtgtcgggcacctggaaggacctgacc
gactccgtcaactccatggcgggcaacctgacttcgcaggtgcggcagatcgcgcaggtg
acgactgcggtggcccggggtgacctgtcgcagaagatccaggtcgacgcgcggggcgag
atcctcgagctgaagaacacgatcaacacgatggtcgaccagctgtccgccttcgccgac
caggtgacgcgggtggcccgcgaggtcggtacggagggccgcctcggcggccaggcgcag
gtgcccggtgtcgcgggtgtgtggcgggacctgaccgactccgtgaacggcatggcgggc
aacctcacggcccaggtgcggaacatctcccaggtggccacggcggtggcgcgcggcgac
ctgtcgcagaagatcgacgtggacgcgcggggcgagatcctcgagctgaagacgacgatc
aacacgatggtcgaccagttgtcgtcgttcgcggagcaggtgacccgggtcgcccgtgag
gtcggtacggacggcatcctcggcggtcaggccgaggtcaagggcgtggcgggcacctgg
aaggacctcacgcagtccgtcaacttcatggcgaacaacctcacctcgcaggtgcgcaac
atcgcggaggtgacgacggccgtcgcgcagggcgacctctcgaagaagatcaccgtcgac
gccaagggcgagatcctggccctggtgacgaccgtcaacacgatggtggaccagctgtcg
tcgttcgcggagcaggtgacgcgggtcgcccgcgaggtgggtaccgaggggcagttgggc
ggccaggcacgcgtgcgggacgtgtccggcatctggaaggacctgacggacaacgtcaac
ctgatggcgaacaacctcaccggccaggtgcggaacatctcgcaggtggccggggccgtc
gccaacggcgatctgacgaagaaggtcaccgtcaaggcgagcggcgaggtggcccagctc
gcggacaccgtcaacacgatggtgacgacgctgtcgtcgttcgcggagcaggtgacccgg
gtcgcccgcgaggtcggcacggacggcgtgctcggcgggcaggcgcgggtggtcggtgtc
gccggtacgtggaaggacctcaccgagtcggtgaactcgatggcgtccaacctgaccggc
caggtccgcaacatcgcgatggtcaccacggccatcgcgcagggcgacctgacgaagaag
atcgacatcgaggcgagcggagagatcctcgaactcaagacgacgatcaacacgatggtg
gaccagctgtcgctcttcgcggagcaggtcatccgcgtcgcccgcgaggtcggtacggag
ggccagttgggcggccaggcccgcgtacgggacgtggccggcacctggcaggacctcacc
gagtccgtgaacgagatggcgaacaacctgacctcgcaggtccggtccatctccgacgtc
gccaccgcggtgacccgcggcgaccacaacgtacgtatcgacgtggacgcgtcgggcgag
atcctggagctgcagggctacatcaactccatgatcacgaacctccgcgagacgaccctg
gccaacaaggagcaggactggctcaagagcaacctcgcccgcatctccgccctcatgcag
ggtcgccgcgacctcacggacgtggccagcctcatcatgagcgagctgacgccggtggtc
tccgcccagcacggcgcgttcttcgtggccgtaccggtcggcagcggcaaggagggcata
gggggcggcgagatcggcgcggtcaccggcgagaacgtctcgtacgagctgcgcatgctg
ggcagctacggctacgcgatgggcaccatgcccaccaccttcgggcccggtgagacgctg
atcggcacggcggcggagcagaagcgcaccatcctggtggagcacgccccgcccggctac
ctgaagatctcctccgggctcggggaggcgcccccgtcgcacgtgatcgtgctgccggtg
atcttcgagggcacggtgctcggcgtggtcgagctggcggcgttccagccgttcacgcag
atccagaaggacttcctcagccagatcgccgaggtcatcgcgaccagcgtgaacaccatc
agcgtcaacaccaagaccgaggtgctgctgcggcagtcgcaggagctgaccgagcagctc
caggaacgttccggcgagctggagaaccggcagaaggcgctccaggagtccaacgagcag
ctggccgagaaggccgagcaactggcgcagaccaacagcgagatcgagatcaagagccgc
gagatcgaggaggcgcggcaggtgctggaggagcgcgccgagcagctgtcggtgtcgatg
cgctacaagtccgagttcctggcgaacatgtcgcacgagctgcgcaccccgctcaactcg
ctgctcatcctggccaagctgctcgccgacaacgccgagggcaatctctccccgaagcag
gtggagttcgccgagaccatccacggcgcgggttcggacctcctccagctgatcaacgac
atcctcgacctgtccaaggtcgaggcgggcaagatggaggtcaccccgacccgtatcgcc
ctggtgcagctcgtggactacgtggaggcgacgttccggccgctcacggcggagaagggg
ctcgacttctcggtacgggtctcgcccgagctgcccgtcaccctcaacaccgacgagcag
cggctgctccaggtgctgcgcaacctcctgtcgaacgcggtgaagttcaccgagaccggc
gccgtcgagctggtcatccggtcggcgggggagagcgtgccggactacgtacgcgagcag
atgctggagcacggctcgctgcgggaggcggacgcggacctgatcgcgttctccgtgacg
gacacgggcatcgggatcgcgcagagcaagatgctggtgatcttcgaggcgttcaagcag
gcggacgggacgacgagccggaagtacggcggtacggggctgggcctgtcgatcagccgg
gagatcgccgggctgctcgggggcgagatccacgccgtcagcgagccggggcgcggctcc
acgttcacgctctacctcccgctccagcccgccgagttgcccccgcagggctacccgcag
ctcaccaccgcggccaagccggcgctcgcgcccgccccgcggccggagccgacggttccc
ggcgcggtgtcggaaccggagcccggtgcggacggcgggcgcggggcggagtccggcgag
gtgccggacggcgtggaggacgccgccggagaccccgcggacggcgacgcgtccgccctg
ccggaggaggacacgggagggccggaggcggacgcacagcgcgccgccgcgtcgctggcg
caccggcgcaggcaccgggcgggacggcggagcgagttggggccgccgctgacggagcag
cagttcccggaccggatggcggcccagggcggcgagtcgtggcgcaacaacggccaggac
ctcgtacgcccggagccgacgcccgcgttccacggccagaaggtgctgatcgtcgacgac
gacatccggaacgtcttcgcgctcaccagcgtgctggagcagaacgggctccaggtgctg
tacgcggagaacggccgcgagggcatcgaggtgctggagcagcacgacgacgccgccgtg
gtgctcatggacatcatgatgccggagatggacgggtacgcgacgacggccgcgatccgt
cgcatgccgcagttcgaggggctgccgatcatcgcgctgacggcgaaggcgatgaagggc
gaccgggagaagagcatcgaggcgggggcgtccgactacgtcaccaagccggtggacacc
gatcacctgttgtccgtcatgggacagtggatggacacgcgctga
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